RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	FSHB	P01225	129 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MUC1	P15941	1255 aa	Predicted RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ADRA2C	P18825	462 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	GNAL	P38405	381 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SNRPG	P62308	76 aa	Known RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PAX2	Q02962	417 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MPPED2	Q15777	294 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	TUSC1	Q2TAM9	212 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MEDAG	Q5VYS4	303 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	TEX36	Q5VZQ5	186 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SLC35F2	Q8IXU6	374 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	CCDC54	Q8NEL0	328 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR8B12	Q8NGG6	310 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR8B3	Q8NGG8	313 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR10Z1	Q8NGY1	313 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	DACT3	Q96B18	629 aa	Predicted RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	C12orf43	Q96C57	262 aa	Known RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ITPKC	Q96DU7	683 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	FAHD2A	Q96GK7	314 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR8B2	Q96RD0	313 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	IL4I1	Q96RQ9	567 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MYCBP	Q99417	103 aa	Predicted RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MICU1	Q9BPX6	476 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	C9orf16	Q9BUW7	83 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	C7orf69	Q9H7B7	122 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	LPAR2	Q9HBW0	351 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	INSIG2	Q9Y5U4	225 aa		10.3	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SNTN	A6NMZ2	147 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PHF1	O43189	567 aa	Predicted RBP	10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	TCF21	O43680	179 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SRSF10	O75494	262 aa	Known RBP	10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	LIPF	P07098	398 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	RPS2	P15880	293 aa	Known RBP	10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ZFP36	P26651	326 aa	Known RBP	10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	CXCR4	P61073	352 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	LCN2	P80188	198 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PAX8	Q06710	450 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ZNF154	Q13106	437 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OCLN	Q16625	522 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR1M1	Q8NGA1	313 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	LYZL4	Q96KX0	146 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	RDH12	Q96NR8	316 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MDFI	Q99750	246 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	RTL8A	Q9BWD3	113 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PAPOLG	Q9BWT3	736 aa	Known RBP	10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PBOV1	Q9GZY1	135 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	DNTTIP1	Q9H147	329 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	S100A14	Q9HCY8	104 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	C8orf4	Q9NR00	106 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR5V1	Q9UGF6	321 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	COPS3	Q9UNS2	423 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	RHBDD3	Q9Y3P4	386 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PCDHGB1	Q9Y5G3	927 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828		R4GMQ9	66 aa		10.29	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OOEP	A6NGQ2	149 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SAC3D1	A6NKF1	404 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR5B21	A6NL26	309 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SRRM5	B3KS81	715 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	EI24	O14681	340 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	GPR37	O15354	613 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MPZL2	O60487	215 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	DHRS3	O75911	302 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MRPL3	P09001	348 aa	Known RBP	10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ACKR3	P25106	362 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	POLR2I	P36954	125 aa	Known RBP	10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PITPNB	P48739	271 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	HCCS	P53701	268 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PRSS12	P56730	875 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	GNB2	P62879	340 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	RIPPLY1	Q0D2K3	151 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ZNF684	Q5T5D7	378 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PRAMEF6	Q5VXH4	476 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	CD276	Q5ZPR3	534 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	BTNL3	Q6UXE8	466 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ZNF841	Q6ZN19	808 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	IL17REL	Q6ZVW7	336 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	KCTD20	Q7Z5Y7	419 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	C11orf53	Q8IXP5	236 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	ELMOD2	Q8IZ81	293 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	PQLC1	Q8N2U9	271 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	GCSAM	Q8N6F7	178 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	DEFB108B	Q8NET1	73 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR5A2	Q8NGI9	324 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	RAB40A	Q8WXH6	277 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OR5P3	Q8WZ94	311 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	EME1	Q96AY2	570 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	JMJD8	Q96S16	334 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	MRI1	Q9BV20	369 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	RIBC2	Q9H4K1	309 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	METTL17	Q9H7H0	456 aa	Predicted RBP	10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	BRD7	Q9NPI1	651 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	UFSP2	Q9NUQ7	469 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	C1orf123	Q9NWV4	160 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	IMPAD1	Q9NX62	359 aa		10.28	□□□□□ -0.76

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