RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 M0R129 80 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 ADAM20O43506 726 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 GYPAP02724 150 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 FCGR1AP12314 374 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 CFPP27918 469 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 PSMB10P40306 273 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 GSK3AP49840 483 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 HCCSP53701 268 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 PSMA6P60900 246 aaKnown RBP12.45□□□□□ -0.42
RAB40B-202ENST00000538809 FGF12P61328 243 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 CSNK2BP67870 215 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 POU4F2Q12837 409 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 TUSC1Q2TAM9 212 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 AADACL4Q5VUY2 407 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
RAB40B-202ENST00000538809 DOK3Q7L591 496 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 FAM90A1Q86YD7 464 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.45□□□□□ -0.42
RAB40B-202ENST00000538809 ZDHHC13Q8IUH4 622 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 SPERTQ8NA61 448 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 UPRTQ96BW1 309 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 PAPOLGQ9BWT3 736 aaKnown RBP12.45□□□□□ -0.42
RAB40B-202ENST00000538809 TTTY10Q9BZA0 68 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 MS4A7Q9GZW8 240 aaPredicted RBP12.45□□□□□ -0.42
RAB40B-202ENST00000538809 RGCCQ9H4X1 137 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 SMURF1Q9HCE7 757 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 C14orf119Q9NWQ9 140 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 LRP12Q9Y561 859 aa12.45□□□□□ -0.42
RAB40B-202ENST00000538809 KIR2DS1A0A191URI9 304 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 MDFIC2A0A1B0GVS7 189 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 TMEM89A2RUT3 159 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 TNFRSF13BO14836 293 aaPredicted RBP12.44□□□□□ -0.42
RAB40B-202ENST00000538809 MRPL3P09001 348 aaKnown RBP12.44□□□□□ -0.42
RAB40B-202ENST00000538809 CFL1P23528 166 aaKnown RBP12.44□□□□□ -0.42
RAB40B-202ENST00000538809 GNALP38405 381 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 ELF3P78545 371 aaPredicted RBP12.44□□□□□ -0.42
RAB40B-202ENST00000538809 MZT1Q08AG7 82 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 KCNJ8Q15842 424 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 LCN1P1Q5VSP4 162 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 BCDIN3DQ7Z5W3 292 aaKnown RBP12.44□□□□□ -0.42
RAB40B-202ENST00000538809 C11orf53Q8IXP5 236 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 OR8B12Q8NGG6 310 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 TMEM163Q8TC26 289 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 LRRC29Q8WV35 223 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 LYZL4Q96KX0 146 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 C1orf147Q96MC9 270 aaPredicted RBP12.44□□□□□ -0.42
RAB40B-202ENST00000538809 CIB1Q99828 191 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 RASSF4Q9H2L5 321 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 NIPAL2Q9H841 368 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 COPS3Q9UNS2 423 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 RHBDD3Q9Y3P4 386 aa12.44□□□□□ -0.42
RAB40B-202ENST00000538809 TRAV38-1A0A0B4J264 116 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 A0A1B0GW55 424 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 PSMD9O00233 223 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 ENSAO43768 121 aaKnown RBP12.43□□□□□ -0.42
RAB40B-202ENST00000538809 FCN3O75636 299 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 CIB2O75838 187 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 LHBP01229 141 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4L2P0CJ85 424 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4L3P0CJ86 424 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4L4P0CJ87 422 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4L5P0CJ88 424 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4L6P0CJ89 424 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4L7P0CJ90 424 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 ACKR3P25106 362 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 ROM1Q03395 351 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 BAMBIQ13145 260 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 NXNL2Q5VZ03 156 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DEGS2Q6QHC5 323 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4L9Q6RFH8 374 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-202ENST00000538809 BRD3OSQ6XYD6 125 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 MEPCEQ7L2J0 689 aaKnown RBP12.43□□□□□ -0.42
RAB40B-202ENST00000538809 KRT74Q7RTS7 529 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 KRT77Q7Z794 578 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 FGFRL1Q8N441 504 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 TCEANCQ8N8B7 351 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 OR1M1Q8NGA1 313 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 CENPNQ96H22 339 aaPredicted RBP12.43□□□□□ -0.42
RAB40B-202ENST00000538809 GABARAPL3Q9BY60 117 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 PRRG3Q9BZD7 231 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 SEMA6AQ9H2E6 1030 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 FAM206AQ9NX38 181 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 ERVK-18Q9QC07 812 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 DUX4Q9UBX2 424 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 LAMP5Q9UJQ1 280 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 OAZ3Q9UMX2 235 aa12.43□□□□□ -0.42
RAB40B-202ENST00000538809 NBEAL1Q6ZS30 2694 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 H3BNX3 289 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 PLATP00750 562 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 IGLV3-1P01715 115 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 SFTPBP07988 381 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 PPIAL4GP0DN37 164 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 DCTDP32321 178 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 POLR2IP36954 125 aaKnown RBP12.42□□□□□ -0.42
RAB40B-202ENST00000538809 COMPP49747 757 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-202ENST00000538809 NPY4RP50391 375 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 GMFBP60983 142 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 ACTR3P61158 418 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 PRDX4Q13162 271 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms