RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CDC14BO60729 498 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 MPIG6BO95866 241 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 HLA-HP01893 362 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 PTGFRP43088 359 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 TAS2R19P59542 299 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 LINC00303Q3SY05 128 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 FBXW9Q5XUX1 488 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 CRIP3Q6Q6R5 217 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 FGD2Q7Z6J4 655 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 TMEM229BQ8NBD8 167 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 SPSB1Q96BD6 273 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 DMRTB1Q96MA1 342 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 TMEM59Q9BXS4 323 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 BEX2Q9BXY8 128 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 ZMAT3Q9HA38 289 aaKnown RBP17.75■□□□□ 0.43
DDX55-205ENST00000538744 GLRX2Q9NS18 164 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 GPR173Q9NS66 373 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 ING3Q9NXR8 418 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 CLCF1Q9UBD9 225 aa17.75■□□□□ 0.43
DDX55-205ENST00000538744 ZNF107Q9UII5 783 aaPredicted RBP17.75■□□□□ 0.43
DDX55-205ENST00000538744 TNRC6AQ8NDV7 1962 aaKnown RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 hCG_38984A0A1B0GV85 526 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 WIPF3A6NGB9 483 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 PRAF2O60831 178 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 SS18L1O75177 396 aaPredicted RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 NDUFB6O95139 128 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 MPGP29372 298 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 OR3A2P47893 321 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 CNN3Q15417 329 aaKnown RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 CDNFQ49AH0 187 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 DMRTC1Q5HYR2 192 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 STEAP1BQ6NZ63 245 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 ZNF782Q6ZMW2 699 aaPredicted RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 DPPA2Q7Z7J5 298 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 TCTE3Q8IZS6 198 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 GABRG1Q8N1C3 465 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 ZBTB8BQ8NAP8 495 aaPredicted RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 TMEM104Q8NE00 496 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 PIGTQ969N2 578 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 CMBLQ96DG6 245 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 CPNE2Q96FN4 548 aaPredicted RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 FYTTD1Q96QD9 318 aaKnown RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 CST11Q9H112 138 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 OR10A4Q9H209 315 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 OR51J1Q9H342 316 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 TP63Q9H3D4 680 aaPredicted RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 NOX3Q9HBY0 568 aa17.74■□□□□ 0.43
DDX55-205ENST00000538744 MOV10Q9HCE1 1003 aaKnown RBP17.74■□□□□ 0.43
DDX55-205ENST00000538744 RTTNQ86VV8 2226 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 CRTAPO75718 401 aaPredicted RBP17.73■□□□□ 0.43
DDX55-205ENST00000538744 MELTFP08582 738 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 NAT2P11245 290 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 CD79AP11912 226 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 STOMP27105 288 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 NKX2-5P52952 324 aaPredicted RBP17.73■□□□□ 0.43
DDX55-205ENST00000538744 FAM3AP98173 230 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 ZNF92Q03936 586 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 CBX3Q13185 183 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 TNK1Q13470 666 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 COLCA1Q6ZS62 124 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 TNFAIP8L1Q8WVP5 186 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 SPSB4Q96A44 273 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 URM1Q9BTM9 101 aaKnown RBP17.73■□□□□ 0.43
DDX55-205ENST00000538744 POU2F3Q9UKI9 436 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 ING4Q9UNL4 249 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 FLVCR2Q9UPI3 526 aa17.73■□□□□ 0.43
DDX55-205ENST00000538744 LOC100509620A0A075B734 347 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 ARPC1BO15143 372 aaKnown RBP17.72■□□□□ 0.43
DDX55-205ENST00000538744 KLK10O43240 276 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 CYB5AP00167 134 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 CD3DP04234 171 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 EDN3P14138 238 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 PRKACBP22694 351 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 RCVRNP35243 200 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 ZNF169Q14929 603 aaPredicted RBP17.72■□□□□ 0.43
DDX55-205ENST00000538744 RBMS2Q15434 407 aaKnown RBP17.72■□□□□ 0.43
DDX55-205ENST00000538744 OR8B8Q15620 311 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 KCNJ8Q15842 424 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 SLC22A6Q4U2R8 563 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 CLVS2Q5SYC1 327 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 IGFL3Q6UXB1 125 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 OR5D18Q8NGL1 313 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 OR1K1Q8NGR3 316 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 DACT3Q96B18 629 aaPredicted RBP17.72■□□□□ 0.43
DDX55-205ENST00000538744 SARAFQ96BY9 339 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 S100A13Q99584 98 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 NICN1Q9BSH3 213 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 BANF2Q9H503 90 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 ELF5Q9UKW6 265 aaPredicted RBP17.72■□□□□ 0.43
DDX55-205ENST00000538744 A0A0A6YYD4 124 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 ZNF503-AS2A6NEH8 195 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 SDHBP21912 280 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 RAB1AP62820 205 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 PLP2Q04941 152 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 CD276Q5ZPR3 534 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 TMEM42Q69YG0 159 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 FJX1Q86VR8 437 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 ZNF584Q8IVC4 421 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 OR56B1Q8NGI3 324 aa17.72■□□□□ 0.43
DDX55-205ENST00000538744 OR4D10Q8NGI6 311 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms