RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CPMP14384 443 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 AKR1C4P17516 323 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 PBLDP30039 288 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 KIR3DL2P43630 455 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 GPR1P46091 355 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 PCP4P48539 62 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 DHPSP49366 369 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 GATMP50440 423 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 RAB28P51157 221 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 LBX1P52954 281 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 ERVFC1-1P60608 527 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 UBE2KP61086 200 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 BEX3Q00994 111 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 GLO1Q04760 184 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 DMWDQ09019 674 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 PMS2P11Q13670 270 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 COTL1Q14019 142 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 IL13RA2Q14627 380 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 IQCJQ1A5X6 159 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 ACSF3Q4G176 576 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 GLYATL3Q5SZD4 288 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 ABLIM2Q6H8Q1 611 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 OR2T2Q6IF00 324 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 SLC18B1Q6NT16 456 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 RSPO2Q6UXX9 243 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 OLIG3Q7RTU3 272 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 SLC16A14Q7RTX9 510 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 LHFPL1Q86WI0 220 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 TCEAL8Q8IYN2 117 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 ZNF101Q8IZC7 436 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 LRRC75AQ8NAA5 344 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 ZNF563Q8TA94 476 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 CD300LFQ8TDQ1 290 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 CASTOR1Q8WTX7 329 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 SLC25A43Q8WUT9 341 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 SOCS4Q8WXH5 440 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 TAAR8Q969N4 342 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 ISOC2Q96AB3 205 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 MRGPRFQ96AM1 343 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 NUS1Q96E22 293 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 FBXO17Q96EF6 278 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 ABHD14BQ96IU4 210 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 NMNAT3Q96T66 252 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 DDA1Q9BW61 102 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 TBL1XR1Q9BZK7 514 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 OR11A1Q9GZK7 315 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 OR8D2Q9GZM6 311 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 SLC25A31Q9H0C2 315 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 OR2AG1Q9H205 316 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 NELFAQ9H3P2 528 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 METTL8Q9H825 291 aaKnown RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 LYRM4Q9HD34 91 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 OR5AC2Q9NZP5 309 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 FLRT3Q9NZU0 649 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 CGGBP1Q9UFW8 167 aaPredicted RBP5.94□□□□□ -1.46
USP28-207ENST00000538475 IL36AQ9UHA7 158 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 IKZF2Q9UKS7 526 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 WASF3Q9UPY6 502 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 YIPF1Q9Y548 306 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 SPACA6W5XKT8 324 aa5.94□□□□□ -1.46
USP28-207ENST00000538475 A0A087WZY1 265 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 A0A0A6YYC8 382 aaPredicted RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 PIGBOS1A0A0B4J2F0 54 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 RBFOX3A6NFN3 312 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ZNF860A6NHJ4 632 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 TMEM210A6NLX4 147 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 H3BQ15 152 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 CLDN34H7C241 214 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 I3L1I5 382 aaPredicted RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 K7N7A8 449 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 HSPA12AO43301 675 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 NARSO43776 548 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 PRICKLE3O43900 615 aaPredicted RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 RPP14O95059 124 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 PMP2P02689 132 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ARG1P05089 322 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 GALTP07902 379 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 SFTPBP07988 381 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 SLC35G4P0C7Q5 338 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ZNF708P17019 499 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 CMPK1P30085 196 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 CCKBRP32239 447 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 TAGLN2P37802 199 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 LSSP48449 732 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 PDLIM4P50479 330 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 MTCP1P56278 107 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 TMEM33P57088 247 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 RAP1BP61224 184 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 RPS15AP62244 130 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 RANP62826 216 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 DUSP2Q05923 314 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 MFGE8Q08431 387 aaPredicted RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 RAB32Q13637 225 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 GPR18Q14330 331 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 ZNF266Q14584 549 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 EBPQ15125 230 aaKnown RBP5.93□□□□□ -1.46
USP28-207ENST00000538475 RAB35Q15286 201 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 TMEM241Q24JQ0 296 aa5.93□□□□□ -1.46
USP28-207ENST00000538475 TMEM52BQ4KMG9 183 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms