RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CCDC74AQ96AQ1 378 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 A0A087WV62 115 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ZC3H12DA2A288 527 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 GFYI3L273 518 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 LY86O95711 162 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 HAAOP46952 286 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 PNLIPRP2P54317 469 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CYHR1Q6ZMK1 362 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 C17orf78Q8N4C9 275 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 KIAA1958Q8N8K9 716 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 AAMDCQ9H7C9 122 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 TBC1D29Q9UFV1 150 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ASCC3Q8N3C0 2202 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 TEX50A0A1B0GTY4 177 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CTSLP07711 333 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 NME1P15531 152 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 PPP1CBP62140 327 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 PPIAP62937 165 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 DPTQ07507 201 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CLPPQ16740 277 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 VMA21Q3ZAQ7 101 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 PLA1AQ53H76 456 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ANKRD16Q6P6B7 361 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ABI3BPQ7Z7G0 1075 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ARRDC1Q8N5I2 433 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CHAC2Q8WUX2 184 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 GALMQ96C23 342 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 TECTBQ96PL2 329 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ZNF768Q9H5H4 540 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 IGHV3-64DA0A0J9YX35 117 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 OR2M5A3KFT3 312 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 MASP2O00187 686 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 TOX3O15405 576 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-209ENST00000537178 OR2J2O76002 312 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 FGF7P21781 194 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 PRDX4Q13162 271 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ZNF528Q3MIS6 628 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 OSR2Q8N2R0 312 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 OR1N1Q8NGS0 311 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 BAHD1Q8TBE0 780 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-209ENST00000537178 PPP1R1CQ8WVI7 109 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ST8SIA2Q92186 375 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 HDGFL3Q9Y3E1 203 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 TRGV10A0A0A0MS01 117 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ARRDC5A6NEK1 342 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ABLIM3O94929 683 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 SLC2A10O95528 541 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 POU2F2P09086 479 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 SLC19A1P41440 591 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ADPRHP54922 357 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ERVFC1-1P60608 527 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
CLIP1-209ENST00000537178 CLEC12BQ2HXU8 276 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 DHRS7BQ6IAN0 325 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ICE1Q9Y2F5 2266 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 A0A096LPE4 126 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 A0A1W2PPZ6 126 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 M0R1B8 84 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 BCL2L11O43521 198 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 TMPRSS11DO60235 418 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 PCBP4P57723 403 aaKnown RBP9.61□□□□□ -0.87
CLIP1-209ENST00000537178 FZD2Q14332 565 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 PAQR6Q6TCH4 344 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 GPR32P1Q8NGA4 272 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 OR4S1Q8NGB4 309 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ZDHHC16Q969W1 377 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 VAMP8Q9BV40 100 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 RNF167Q9H6Y7 350 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 LYRM2Q9NU23 88 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-209ENST00000537178 MED29Q9NX70 200 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 MMP17Q9ULZ9 603 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 TMEM202A6NGA9 273 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 FAM157BP0CG42 384 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 CLDN15P56746 228 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 GPNMBQ14956 572 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 OR2G2Q8NGZ5 317 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 PP6455Q8WZ26 134 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ADGRL4Q9HBW9 690 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 MBNL1Q9NR56 388 aaKnown RBP9.61□□□□□ -0.87
CLIP1-209ENST00000537178 SLC22A13Q9Y226 551 aa9.61□□□□□ -0.87
CLIP1-209ENST00000537178 ZNF785A8K8V0 405 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 MKRN2OSH3BPM6 223 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 SULT1A3P0DMM9 295 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 SULT1A4P0DMN0 295 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 SLC6A12P48065 614 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 FUT6P51993 359 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 MYBPHQ13203 477 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 TMEM128Q5BJH2 165 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 TCTN3Q6NUS6 607 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 SPPL3Q8TCT6 385 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 ZNF576Q9H609 170 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 MARCH5Q9NX47 278 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 CIDEAO60543 219 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 TM4SF4P48230 202 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 KCNJ3P48549 501 aa9.6□□□□□ -0.87
CLIP1-209ENST00000537178 SUMO3P55854 103 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-209ENST00000537178 PJVKQ0ZLH3 352 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms