RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 GSTZ1O43708 216 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-208ENST00000537004 LMX1BO60663 402 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 SS18L1O75177 396 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-208ENST00000537004 CD3GP09693 182 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 AGTR1P30556 359 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 ABLIM2Q6H8Q1 611 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 LINGO2Q7L985 606 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 KRT74Q7RTS7 529 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 PRSS45Q7RTY3 260 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.39□□□□□ -0.75
CLIP1-208ENST00000537004 NUFIP2Q7Z417 695 aaKnown RBP10.39□□□□□ -0.75
CLIP1-208ENST00000537004 LURAP1LQ8IV03 231 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 PLPP7Q8NBV4 271 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 FAM222BQ8WU58 562 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 SMIM4Q8WVI0 70 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 NABP1Q96AH0 204 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 HAVCR1Q96D42 359 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 WFIKKN1Q96NZ8 548 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 ULBP2Q9BZM5 246 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 MOB1AQ9H8S9 216 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 NPAP1Q9NZP6 1156 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 NLKQ9UBE8 527 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 NUFIP1Q9UHK0 495 aaKnown RBP10.39□□□□□ -0.75
CLIP1-208ENST00000537004 CACNG2Q9Y698 323 aa10.39□□□□□ -0.75
CLIP1-208ENST00000537004 A0A1W2PPR1 153 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 FAM221AA4D161 298 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 FAM172BPA6NC97 362 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 CDK2P24941 298 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 SRP9P49458 86 aaKnown RBP10.38□□□□□ -0.75
CLIP1-208ENST00000537004 PRKXP51817 358 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 RAB11BQ15907 218 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 TMEM69Q5SWH9 247 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 RSBN1Q5VWQ0 802 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-208ENST00000537004 GLT8D1Q68CQ7 371 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 FAM166AQ6J272 317 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 OR51D1Q8NGF3 324 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 OR51A2Q8NGJ7 313 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 CAPSLQ8WWF8 208 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 AUNIPQ9H7T9 357 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 PLSCR4Q9NRQ2 329 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 ZNF275Q9NSD4 429 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-208ENST00000537004 RCE1Q9Y256 329 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 ITPR3Q14573 2671 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 F8P00451 2351 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 A0A0B4J293 547 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 MEGF11A6BM72 1044 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 SYT7O43581 403 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 SLC6A1P30531 599 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 NTF4P34130 210 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 PTH2RP49190 550 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 POU3F4P49335 361 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 ZNF84P51523 738 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 ZNF121P58317 390 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-208ENST00000537004 GRB2P62993 217 aaKnown RBP10.38□□□□□ -0.75
CLIP1-208ENST00000537004 PLA2G7Q13093 441 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 ENDOGQ14249 297 aaKnown RBP10.38□□□□□ -0.75
CLIP1-208ENST00000537004 TSC22D1Q15714 1073 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 CDH24Q86UP0 819 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 LRRC18Q8N456 261 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 OR6K3Q8NGY3 331 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 FAM3DQ96BQ1 224 aa10.38□□□□□ -0.75
CLIP1-208ENST00000537004 MTORP42345 2549 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 ZFHX3Q15911 3703 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 SIAH2O43255 324 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 SULT1B1O43704 296 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 SLC2A1P11166 492 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 DDOSTP39656 456 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 CX3CR1P49238 355 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 SPOCK1Q08629 439 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 AAED1Q7RTV5 226 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 GJC3Q8NFK1 279 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 OR51E1Q8TCB6 317 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 UPRTQ96BW1 309 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 FGGYQ96C11 551 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-208ENST00000537004 NKX3-1Q99801 234 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-208ENST00000537004 NEK6Q9HC98 313 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 N6AMT1Q9Y5N5 214 aa10.37□□□□□ -0.75
CLIP1-208ENST00000537004 LOC100289279A0A1B0GTE1 492 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 A0A1B0GTI1 187 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 A0A1B0GVI7 797 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 C16orf97H3BN30 126 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 GABARAPH6UMI1 98 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 CYTIPO60759 359 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 CD37P11049 281 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 HTR2CP28335 458 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 BTCP35070 178 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 GNALP38405 381 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 GDNFP39905 211 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 MRPS34P82930 218 aaKnown RBP10.36□□□□□ -0.75
CLIP1-208ENST00000537004 GALK2Q01415 458 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 DAZAP2Q15038 168 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-208ENST00000537004 C2orf76Q3KRA6 126 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 GLYATL3Q5SZD4 288 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 ZNF283Q8N7M2 679 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 NKAIN3Q8N8D7 197 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 OR8B12Q8NGG6 310 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 OR1J2Q8NGS2 313 aa10.36□□□□□ -0.75
CLIP1-208ENST00000537004 GCDHQ92947 438 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms