RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 ZNF678Q5SXM1 525 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 C9orf66Q5T8R8 295 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 KHDRBS2Q5VWX1 349 aaKnown RBP5□□□□□ -1.61
CCDC60-203ENST00000536742 LIPJQ5W064 366 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 GPRIN3Q6ZVF9 776 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 MYPOPQ86VE0 399 aaPredicted RBP5□□□□□ -1.61
CCDC60-203ENST00000536742 FAM9CQ8IZT9 166 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 Q8N2B8 174 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 TEX9Q8N6V9 391 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 ATP6V1C2Q8NEY4 427 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 OR5AU1Q8NGC0 362 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 UBTD2Q8WUN7 234 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 BCL2L2Q92843 193 aaPredicted RBP5□□□□□ -1.61
CCDC60-203ENST00000536742 LHX4Q969G2 390 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 SPSB1Q96BD6 273 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 CMTM7Q96FZ5 175 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 VSTM2LQ96N03 204 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 NAA11Q9BSU3 229 aaPredicted RBP5□□□□□ -1.61
CCDC60-203ENST00000536742 EFCAB11Q9BUY7 163 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 BARHL1Q9BZE3 327 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 FAM107BQ9H098 131 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 MID1IP1Q9NPA3 183 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 EMCNQ9ULC0 261 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 FZR1Q9UM11 496 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 SNX6Q9UNH7 406 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 KIAA2026Q5HYC2 2103 aa5□□□□□ -1.61
CCDC60-203ENST00000536742 TANC2Q9HCD6 1990 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 AZIN1O14977 448 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 ARPC2O15144 300 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 KRT33AO76009 404 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 FAM107AO95990 144 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 PAHP00439 452 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 FAM58BPP0C7Q3 252 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 PATE4P0C8F1 98 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 SMIM18P0DKX4 95 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 ZNF35P13682 527 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 CSNK2A2P19784 350 aaPredicted RBP4.99□□□□□ -1.61
CCDC60-203ENST00000536742 FASP25445 335 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 GTF2E2P29084 291 aaKnown RBP4.99□□□□□ -1.61
CCDC60-203ENST00000536742 MDH2P40926 338 aaKnown RBP4.99□□□□□ -1.61
CCDC60-203ENST00000536742 WNT5AP41221 380 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 KLF3P57682 345 aaPredicted RBP4.99□□□□□ -1.61
CCDC60-203ENST00000536742 GABPB1Q06547 395 aaPredicted RBP4.99□□□□□ -1.61
CCDC60-203ENST00000536742 FOXF1Q12946 379 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 IMPG1Q17R60 797 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 UNC50Q53HI1 259 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 METTL11BQ5VVY1 283 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 ZNF774Q6NX45 483 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 CCDC121Q6ZUS5 278 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 MISPQ8IVT2 679 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 CCDC36Q8IYA8 594 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 TMCO5AQ8N6Q1 288 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 OR5B2Q96R09 309 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 ZNF382Q96SR6 550 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 PITX2Q99697 317 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 URM1Q9BTM9 101 aaKnown RBP4.99□□□□□ -1.61
CCDC60-203ENST00000536742 ELOVL6Q9H5J4 265 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 AHSPQ9NZD4 102 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 MIOXQ9UGB7 285 aa4.99□□□□□ -1.61
CCDC60-203ENST00000536742 IGLV3-9A0A075B6K5 115 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 NUPR2A6NF83 97 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 CEACAM18A8MTB9 384 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SULT2B1O00204 365 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SLC28A1O00337 649 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SAP18O00422 153 aaKnown RBP4.98□□□□□ -1.61
CCDC60-203ENST00000536742 HDAC3O15379 428 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 CCDC22O60826 627 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 EDF1O60869 148 aaKnown RBP4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SNNO75324 88 aaPredicted RBP4.98□□□□□ -1.61
CCDC60-203ENST00000536742 DCTN3O75935 186 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 FGF4P08620 206 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 RPS17P08708 135 aaKnown RBP4.98□□□□□ -1.61
CCDC60-203ENST00000536742 THRBP10828 461 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 RPS2P15880 293 aaKnown RBP4.98□□□□□ -1.61
CCDC60-203ENST00000536742 GNB3P16520 340 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SH3BGRP55822 239 aaPredicted RBP4.98□□□□□ -1.61
CCDC60-203ENST00000536742 CHIT1Q13231 466 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 GTDC1Q4AE62 458 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SLC35D3Q5M8T2 416 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 METTL21CQ5VZV1 264 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 FAM53AQ6NSI3 398 aaPredicted RBP4.98□□□□□ -1.61
CCDC60-203ENST00000536742 MED27Q6P2C8 311 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 GSG1LQ6UXU4 331 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 APOOLQ6UXV4 268 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 ZCCHC23Q6ZST2 131 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 TMPPEQ6ZT21 453 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SLC16A9Q7RTY1 509 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 GOLGA7Q7Z5G4 137 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 LRRC34Q8IZ02 419 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 CCDC197Q8NCU1 140 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SYNPRQ8TBG9 265 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 SLC7A13Q8TCU3 470 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 HPSE2Q8WWQ2 592 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 LRR1Q96L50 414 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 AMDHD1Q96NU7 426 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 TMEM237Q96Q45 408 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 Q9H8V8 135 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 FGFR1OP2Q9NVK5 253 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 TAS2R9Q9NYW1 312 aa4.98□□□□□ -1.61
CCDC60-203ENST00000536742 GIMAP2Q9UG22 337 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms