RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 OR56B2PQ8NGI1 322 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 ZNF420Q8TAQ5 688 aaPredicted RBP10.4□□□□□ -0.74
PRKDC-207ENST00000536483 LRTOMTQ8WZ04 291 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 MNTQ99583 582 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 GABARAPL3Q9BY60 117 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 OR10A2Q9H208 303 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 ZNF696Q9H7X3 374 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 ZNF69Q9UC07 566 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 NUP50Q9UKX7 468 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 TMEM14AQ9Y6G1 99 aa10.4□□□□□ -0.74
PRKDC-207ENST00000536483 DNAJC9-AS1A6NH13 148 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 CEACAM18A8MTB9 384 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 TRAPPC2LH3BP13 241 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 MITFO75030 526 aaPredicted RBP10.39□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF254O75437 659 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 LHBP01229 141 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 PPIAL4GP0DN37 164 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 SLC2A1P11166 492 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 PSMB10P40306 273 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 PRSS12P56730 875 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 PSMA6P60900 246 aaKnown RBP10.39□□□□□ -0.75
PRKDC-207ENST00000536483 SEC61A1P61619 476 aaKnown RBP10.39□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF154Q13106 437 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 MED21Q13503 144 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 MPPED2Q15777 294 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 C11orf91Q3C1V1 193 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 ARMCX4Q5H9R4 360 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 FAM76BQ5HYJ3 339 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 KLF17Q5JT82 389 aaPredicted RBP10.39□□□□□ -0.75
PRKDC-207ENST00000536483 LCN1P1Q5VSP4 162 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 KCTD18Q6PI47 426 aaPredicted RBP10.39□□□□□ -0.75
PRKDC-207ENST00000536483 DOK3Q7L591 496 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 AMIGO2Q86SJ2 522 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 CSNK2A3Q8NEV1 391 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 TMEM163Q8TC26 289 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 THEM6Q8WUY1 208 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 ASB17Q8WXJ9 295 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 OTULINQ96BN8 352 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 REEP6Q96HR9 211 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 TMEM246Q9BRR3 403 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 TLNRD1Q9H1K6 362 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 FN3KRPQ9HA64 309 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 MIOXQ9UGB7 285 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 KLHDC2Q9Y2U9 406 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 AUP1Q9Y679 476 aa10.39□□□□□ -0.75
PRKDC-207ENST00000536483 A0A0U1RQV5 110 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 SLC22A31A6NKX4 558 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 FAM20BO75063 409 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 CYB5R3P00387 301 aaPredicted RBP10.38□□□□□ -0.75
PRKDC-207ENST00000536483 CST4P01036 141 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 IGLV3-1P01715 115 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 ANXA2P07355 339 aaKnown RBP10.38□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF12P17014 697 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 GSK3AP49840 483 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 BAMBIQ13145 260 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 TIGD6Q17RP2 521 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 DCDC5Q6ZRR9 648 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 FAM57BQ71RH2 274 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 SPATC1Q76KD6 591 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.38□□□□□ -0.75
PRKDC-207ENST00000536483 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF679Q8IYX0 411 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 GALNT4Q8N4A0 578 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 OR11L1Q8NGX0 322 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 C1orf147Q96MC9 270 aaPredicted RBP10.38□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF48Q96MX3 618 aaPredicted RBP10.38□□□□□ -0.75
PRKDC-207ENST00000536483 CIB1Q99828 191 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 ADAT1Q9BUB4 502 aaKnown RBP10.38□□□□□ -0.75
PRKDC-207ENST00000536483 ABCB9Q9NP78 766 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 TRIM36Q9NQ86 728 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 C14orf119Q9NWQ9 140 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 FAM206AQ9NX38 181 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 USE1Q9NZ43 259 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 SCOCQ9UIL1 159 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 LAMP5Q9UJQ1 280 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 OAZ3Q9UMX2 235 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 INSIG2Q9Y5U4 225 aa10.38□□□□□ -0.75
PRKDC-207ENST00000536483 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
PRKDC-207ENST00000536483 ANKRD30BLA7E2S9 258 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 NDUFA2O43678 99 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 IRF2P14316 349 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 ATP6V1B1P15313 513 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 PEX2P28328 305 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
PRKDC-207ENST00000536483 PAX8Q06710 450 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 TMED1Q13445 227 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 SLC25A30Q5SVS4 291 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 LRRN1Q6UXK5 716 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF841Q6ZN19 808 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 Q6ZSR3 168 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 GID4Q8IVV7 300 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 FTMTQ8N4E7 242 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 TCEANCQ8N8B7 351 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 TRUB1Q8WWH5 349 aaKnown RBP10.37□□□□□ -0.75
PRKDC-207ENST00000536483 TAF15Q92804 592 aaKnown RBP eCLIP10.37□□□□□ -0.75
PRKDC-207ENST00000536483 ITPKCQ96DU7 683 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 NEIL1Q96FI4 390 aaPredicted RBP10.37□□□□□ -0.75
PRKDC-207ENST00000536483 PGAM5Q96HS1 289 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 OR8B4Q96RC9 309 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms