RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CST5P28325 142 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 CD1CP29017 333 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SHC1P29353 583 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RBMS1P29558 406 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 CD80P33681 288 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 BTCP35070 178 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 IDH2P48735 452 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 STK19P49842 368 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 PPOXP50336 477 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 DAPP51397 102 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CAV2P51636 162 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ZNF41P51814 821 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 AKR1C2P52895 323 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 PNLIPRP1P54315 467 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 F2RL1P55085 397 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 HBA1P69905 142 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CCL7P80098 99 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FABP5Q01469 135 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SPIBQ01892 262 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 NAAAQ02083 359 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TGM3Q08188 693 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RAB31Q13636 194 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 C1DQ13901 141 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 ZNF235Q14590 738 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SPHARQ15513 63 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 UBE2V2Q15819 145 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 HSPB2Q16082 182 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MAPK14Q16539 360 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RBBP7Q16576 425 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TAZQ16635 292 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CTXN3Q4LDR2 81 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC22A6Q4U2R8 563 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MPPE1Q53F39 396 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 EIPR1Q53HC9 387 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ZNF667Q5HYK9 610 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 PLEKHS1Q5SXH7 462 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 HENMT1Q5T8I9 393 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 SAMD13Q5VXD3 122 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 PRR27Q6MZM9 219 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 APOBEC3HQ6NTF7 200 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 RGMBQ6NW40 437 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 STEAP1BQ6NZ63 245 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FAHD1Q6P587 224 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ZNF790Q6PG37 636 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MFSD7Q6UXD7 560 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 UNQ9370/PRO34162Q6UXP9 181 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 LINGO4Q6UY18 593 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 GLDNQ6ZMI3 551 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 FCRLAQ7L513 359 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MRPL21Q7Z2W9 205 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR2W3Q7Z3T1 314 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SPATA19Q7Z5L4 167 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TMEM144Q7Z5S9 345 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TMED4Q7Z7H5 227 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TRPT1Q86TN4 253 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 LRRTM1Q86UE6 522 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CPOQ8IVL8 374 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ARHGAP12Q8IWW6 846 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TUSC5Q8IXB3 177 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 C9orf40Q8IXQ3 194 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 KIR2DL5AQ8N109 375 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FAM58AQ8N1B3 248 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 GTPBP8Q8N3Z3 284 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 C17orf78Q8N4C9 275 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TOMM5Q8N4H5 51 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 KCNRGQ8N5I3 272 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FAM24BQ8N5W8 94 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC35G3Q8N808 338 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 BMPERQ8N8U9 685 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CCDC71LQ8N9Z2 235 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC38A9Q8NBW4 561 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RELL2Q8NC24 303 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 HJURPQ8NCD3 748 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 CCNYQ8ND76 341 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ZNF738Q8NE65 137 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR11H1Q8NG94 326 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR4C5Q8NGB2 326 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR4K5Q8NGD3 323 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR52B6Q8NGF0 335 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR4D5Q8NGN0 318 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR1K1Q8NGR3 316 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR11H2Q8NH07 326 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SPPL2AQ8TCT8 520 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SDR42E1Q8WUS8 393 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ASB17Q8WXJ9 295 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR8D1Q8WZ84 308 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SEMA4DQ92854 862 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 DNASE1L2Q92874 299 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ADIPOR1Q96A54 375 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RNFT2Q96EX2 444 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SFRP2Q96HF1 295 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 REEP6Q96HR9 211 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC41A2Q96JW4 573 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC35E1Q96K37 410 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR5B2Q96R09 309 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR4K3Q96R72 315 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CD180Q99467 661 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 COPS8Q99627 209 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CCDC3Q9BQI4 270 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 C20orf144Q9BQM9 153 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms