RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 HIST2H2BEQ16778 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 Q499Y3 187 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 MIDNQ504T8 468 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 MESTQ5EB52 335 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.44□□□□□ -0.42
LIG1-203ENST00000536218 MITD1Q8WV92 249 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BHQ93079 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 INTS14Q96SY0 518 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BNQ99877 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H2BMQ99879 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 FAM86C1Q9NVL1 165 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 GSKIPQ9P0R6 139 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 TMEM131Q92545 1883 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 IGHV3-20A0A0C4DH32 117 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 A8MWP6 167 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 SFTPBP07988 381 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 SLC37A1P57057 533 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 ADAD2Q8NCV1 583 aaKnown RBP12.44□□□□□ -0.42
LIG1-203ENST00000536218 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 ZNF563Q8TA94 476 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 ADAMTS18Q8TE60 1221 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 NKD1Q969G9 470 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 MVB12AQ96EY5 273 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 NDUFAF3Q9BU61 184 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 UBQLN4Q9NRR5 601 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 FGF21Q9NSA1 209 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 IL17BQ9UHF5 180 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 FITM1A5D6W6 292 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 CLPSP04118 112 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 HIST1H1CP16403 213 aaKnown RBP12.44□□□□□ -0.42
LIG1-203ENST00000536218 COTL1Q14019 142 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 C2orf76Q3KRA6 126 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 SLC35D3Q5M8T2 416 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 C1QL4Q86Z23 238 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 OR10AC1Q8NH08 325 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 OR5AK2Q8NH90 309 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 SLC2A12Q8TD20 617 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 ZNRF4Q8WWF5 429 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 TMEM106AQ96A25 262 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 NTNG2Q96CW9 530 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 SEH1LQ96EE3 360 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 DDA1Q9BW61 102 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 OR14J1Q9UGF5 321 aa12.44□□□□□ -0.42
LIG1-203ENST00000536218 MPDZO75970 2070 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 CACNA1EQ15878 2313 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 SCDO00767 359 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 NUDT21O43809 227 aaKnown RBP12.43□□□□□ -0.42
LIG1-203ENST00000536218 NUDT14O95848 222 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 GPANK1O95872 356 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 TRGC2P03986 189 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 FBLP22087 321 aaKnown RBP12.43□□□□□ -0.42
LIG1-203ENST00000536218 SLC6A6P31641 620 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 APLNRP35414 380 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 CD200P41217 278 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 JAGN1Q8N5M9 183 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 GPX8Q8TED1 209 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 NUDT9Q9BW91 350 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 SERTAD3Q9UJW9 196 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 ELOA3DA6NLF2 546 aaPredicted RBP12.43□□□□□ -0.42
LIG1-203ENST00000536218 CDC40O60508 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
LIG1-203ENST00000536218 GLB1P16278 677 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 PPICP45877 212 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 RHEBQ15382 184 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 ELOA3BQ3SY89 546 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 HIST2H3PS2Q5TEC6 136 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 GGNBP1Q5YKI7 109 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 LANCL3Q6ZV70 420 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 ZNF676Q8N7Q3 588 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 ELOA3Q8NG57 546 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 OR13C9Q8NGT0 318 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 OR51F2Q8NH61 342 aa12.43□□□□□ -0.42
LIG1-203ENST00000536218 FAM212BQ9NTI7 297 aaPredicted RBP12.43□□□□□ -0.42
LIG1-203ENST00000536218 ZNF346Q9UL40 294 aaKnown RBP12.43□□□□□ -0.42
LIG1-203ENST00000536218 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 K7ESF4 209 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 EIF1AYO14602 144 aaKnown RBP12.42□□□□□ -0.42
LIG1-203ENST00000536218 ADAP1O75689 374 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 UTS2O95399 124 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 NPSP0C0P6 89 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 EIF1AXP47813 144 aaKnown RBP12.42□□□□□ -0.42
LIG1-203ENST00000536218 RASGEF1BQ0VAM2 473 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 UBE2V2Q15819 145 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 HLA-DQA1Q5Y7H0 255 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 C16orf47Q6ZP98 133 aaPredicted RBP12.42□□□□□ -0.42
LIG1-203ENST00000536218 ZNF664Q8N3J9 261 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 OR51A4Q8NGJ6 313 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 THAP3Q8WTV1 239 aaPredicted RBP12.42□□□□□ -0.42
LIG1-203ENST00000536218 CCDC74AQ96AQ1 378 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 ZNF524Q96C55 264 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 OR5B2Q96R09 309 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 RTN4RQ9BZR6 473 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 IKZF2Q9UKS7 526 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 CYB5BO43169 146 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 GIMD1P0DJR0 217 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 BPIFB3P59826 476 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 RNASE10Q5GAN6 216 aaKnown RBP12.42□□□□□ -0.42
LIG1-203ENST00000536218 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 DNASE2BQ8WZ79 361 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms