RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ZNF121P58317 390 aaPredicted RBP10.88□□□□□ -0.67
RTN3-207ENST00000536011 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 LINC01590Q5TEZ4 76 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 ZNF826PQ6ZT77 177 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 FAM57BQ71RH2 274 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 FAM90A1Q86YD7 464 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 CMTM4Q8IZR5 234 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 TBC1D15Q8TC07 691 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 LRRC29Q8WV35 223 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 ST8SIA4Q92187 359 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 DMRTB1Q96MA1 342 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 CCT8L2Q96SF2 557 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 RTL8AQ9BWD3 113 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 NIPAL2Q9H841 368 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 SMURF1Q9HCE7 757 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 ACOXLQ9NUZ1 547 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 VNN3Q9NY84 501 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 DNAJC27Q9NZQ0 273 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 MMP24Q9Y5R2 645 aa10.88□□□□□ -0.67
RTN3-207ENST00000536011 IGHV1-69DA0A0B4J2H0 117 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 C5orf63A6NC05 138 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 FAM183AA6NL82 134 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 TMEM210A6NLX4 147 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 DVL1O14640 695 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 PRODHO43272 600 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 E2F6O75461 281 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 FAM107AO95990 144 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 HMGN1P05114 100 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 LYNP07948 512 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 MMP9P14780 707 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 Q6YL49 198 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 C17orf107Q6ZR85 190 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 BTN2A1Q7KYR7 527 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 GALNT4Q8N4A0 578 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 IQCF1Q8N6M8 205 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 SCCPDHQ8NBX0 429 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 OR1M1Q8NGA1 313 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 SGK3Q96BR1 496 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 NIPSNAP1Q9BPW8 284 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 CHID1Q9BWS9 393 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 C1orf21Q9H246 121 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 OR51V1Q9H2C8 321 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 YY1AP1Q9H869 796 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 MED20Q9H944 212 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
RTN3-207ENST00000536011 CAB39Q9Y376 341 aaPredicted RBP10.87□□□□□ -0.67
RTN3-207ENST00000536011 MPC1Q9Y5U8 109 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 KPTNQ9Y664 436 aa10.87□□□□□ -0.67
RTN3-207ENST00000536011 CENPVL3A0A0U1RRI6 287 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 A0A1B0GVI7 797 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 FAM181BA6NEQ2 426 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 NKX6-3A6NJ46 265 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 AQP12BA6NM10 295 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 NDUFB3O43676 98 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 KNG1P01042 644 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
RTN3-207ENST00000536011 ANOS1P23352 680 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 POU1F1P28069 291 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 RAG2P55895 527 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 HOXA4Q00056 320 aaPredicted RBP10.86□□□□□ -0.67
RTN3-207ENST00000536011 MS4A2Q01362 244 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 CDONQ4KMG0 1287 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 PLBD1Q6P4A8 553 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 FIP1L1Q6UN15 594 aaKnown RBP10.86□□□□□ -0.67
RTN3-207ENST00000536011 WDR82Q6UXN9 313 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 AQP12AQ8IXF9 295 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 TIGD4Q8IY51 512 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
RTN3-207ENST00000536011 OTOSQ8NHW6 89 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 LHX4Q969G2 390 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 ITFG2Q969R8 447 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 SIRPDQ9H106 197 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 DNTTIP1Q9H147 329 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 TLNRD1Q9H1K6 362 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 CNTD2Q9H8S5 307 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 BRD7Q9NPI1 651 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 DNAJB11Q9UBS4 358 aa10.86□□□□□ -0.67
RTN3-207ENST00000536011 SOX21Q9Y651 276 aaPredicted RBP10.86□□□□□ -0.67
RTN3-207ENST00000536011 IGHV3OR15-7A0A075B7D8 119 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 NDUFA7O95182 113 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 MELTFP08582 738 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 OSMP13725 252 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 PSMA6P60900 246 aaKnown RBP10.85□□□□□ -0.67
RTN3-207ENST00000536011 ARF6P62330 175 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 CSNK2BP67870 215 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 GINS1Q14691 196 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 KLHL12Q53G59 568 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 LRRC10Q5BKY1 277 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 WDR38Q5JTN6 314 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 RUSC1-AS1Q66K80 236 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 KCTD8Q6ZWB6 473 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 WDR86Q86TI4 376 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 ADGRG5Q8IZF4 528 aa10.85□□□□□ -0.67
RTN3-207ENST00000536011 KIR3DL3Q8N743 410 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms