RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TMEM246Q9BRR3 403 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 YTHDF1Q9BYJ9 559 aaKnown RBP13.72□□□□□ -0.21
ATL3-202ENST00000535789 TTTY10Q9BZA0 68 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 BRD7Q9NPI1 651 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 UFSP2Q9NUQ7 469 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 FKBP14Q9NWM8 211 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 MRPL15Q9P015 296 aaKnown RBP13.72□□□□□ -0.21
ATL3-202ENST00000535789 LRP12Q9Y561 859 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 TENM1Q9UKZ4 2725 aa13.72□□□□□ -0.21
ATL3-202ENST00000535789 GGT3PA6NGU5 568 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 RNF212BA8MTL3 300 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 ACKR3P25106 362 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 PSMA6P60900 246 aaKnown RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 RPS7P62081 194 aaKnown RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 PAX2Q02962 417 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 OR8G1Q15617 311 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 ZNF404Q494X3 552 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 FAHD2BQ6P2I3 314 aaPredicted RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 RHOUQ7L0Q8 258 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 SPICQ8N5J4 248 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 THEM6Q8WUY1 208 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 RFKQ969G6 155 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 DACT3Q96B18 629 aaPredicted RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 FAHD2AQ96GK7 314 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 TEAD3Q99594 435 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 FGF23Q9GZV9 251 aaPredicted RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 METTL17Q9H7H0 456 aaPredicted RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 ZNF696Q9H7X3 374 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 AMBNQ9NP70 447 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 PAK1IP1Q9NWT1 392 aaPredicted RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 PSORS1C1Q9UIG5 152 aa13.71□□□□□ -0.21
ATL3-202ENST00000535789 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.71□□□□□ -0.21
ATL3-202ENST00000535789 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.21
ATL3-202ENST00000535789 A0A0G2JMP0 313 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 A0A0X1KG70 313 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 SLC22A31A6NKX4 558 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 PSMD9O00233 223 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 FCN3O75636 299 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 TNFAIP8O95379 198 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 H2BFMP0C1H6 154 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 EGR1P18146 543 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 PCMT1P22061 227 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 SRP14P37108 136 aaKnown RBP13.7□□□□□ -0.22
ATL3-202ENST00000535789 CSNK2BP67870 215 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 TMED1Q13445 227 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 OR8B8Q15620 311 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 GFOD2Q3B7J2 385 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 KCTD21Q4G0X4 260 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 DCAF12L2Q5VW00 463 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 LYPD2Q6UXB3 125 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 ZNF826PQ6ZT77 177 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 KLHL36Q8N4N3 616 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 ZNF454Q8N9F8 522 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 OR4M2Q8NGB6 313 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 OR8B12Q8NGG6 310 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 SGCDQ92629 289 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 GGHQ92820 318 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 OPA3Q9H6K4 179 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 MRPS18AQ9NVS2 196 aaKnown RBP13.7□□□□□ -0.22
ATL3-202ENST00000535789 HAO2Q9NYQ3 351 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 H2AFY2Q9P0M6 372 aaPredicted RBP13.7□□□□□ -0.22
ATL3-202ENST00000535789 WARS2Q9UGM6 360 aaKnown RBP13.7□□□□□ -0.22
ATL3-202ENST00000535789 MYRFQ9Y2G1 1151 aa13.7□□□□□ -0.22
ATL3-202ENST00000535789 RPL36Q9Y3U8 105 aaKnown RBP13.7□□□□□ -0.22
ATL3-202ENST00000535789 SNTNA6NMZ2 147 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 C3orf80F5H4A9 247 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 IFNL4K9M1U5 179 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 GMDSO60547 372 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 WNT2P09544 360 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 PIPP12273 146 aaPredicted RBP13.69□□□□□ -0.22
ATL3-202ENST00000535789 CD80P33681 288 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 MTNR1AP48039 350 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 GSK3AP49840 483 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 GABARAPL2P60520 117 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 SLC35A2P78381 396 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 TIGD6Q17RP2 521 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 C1QL2Q7Z5L3 287 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 C11orf53Q8IXP5 236 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 MUC20Q8N307 709 aaPredicted RBP13.69□□□□□ -0.22
ATL3-202ENST00000535789 SEMA6DQ8NFY4 1073 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 LGALS12Q96DT0 336 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 RNFT2Q96EX2 444 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 DUSP21Q9H596 190 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 ADGRL4Q9HBW9 690 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 FAM206AQ9NX38 181 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 CNOT2Q9NZN8 540 aaKnown RBP13.69□□□□□ -0.22
ATL3-202ENST00000535789 CTSZQ9UBR2 303 aa13.69□□□□□ -0.22
ATL3-202ENST00000535789 PPIAL4EA0A075B759 164 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 PPIAL4CA0A0B4J2A2 164 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 EFCAB10A6NFE3 127 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 PPIAL4DF5H284 164 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 MAGEB4O15481 346 aaPredicted RBP13.68□□□□□ -0.22
ATL3-202ENST00000535789 SRSF10O75494 262 aaKnown RBP13.68□□□□□ -0.22
ATL3-202ENST00000535789 FOXH1O75593 365 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 FSTL3O95633 263 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 HTR1AP08908 422 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 PPIAL4FP0DN26 164 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 RPS2P15880 293 aaKnown RBP13.68□□□□□ -0.22
ATL3-202ENST00000535789 ZNF12P17014 697 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms