RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CCL17Q92583 94 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 RSRP1Q9BUV0 290 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 ZNF121P58317 390 aaPredicted RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 B4GALNT1Q00973 533 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 C19orf35Q6ZS72 473 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 CMTM3Q96MX0 182 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 AUP1Q9Y679 476 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 IGLV3-27P01718 113 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 GABRG2P18507 467 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 WIPI1Q5MNZ9 446 aaPredicted RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 DHRS4L2Q6PKH6 230 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 Q6ZNB5 142 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 C16orf47Q6ZP98 133 aaPredicted RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 SLC25A26Q70HW3 274 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 EXD3Q8N9H8 876 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 OR1J1Q8NGS3 322 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 LHX4Q969G2 390 aa11.39□□□□□ -0.59
SPG11-203ENST00000535302 DDX60LQ5H9U9 1706 aaKnown RBP11.39□□□□□ -0.59
SPG11-203ENST00000535302 SLC22A20A6NK97 555 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 PMS2P2O95744 297 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 G6PCP35575 357 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 ACOT6Q3I5F7 207 aaPredicted RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 LHX8Q68G74 356 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 KLF13Q9Y2Y9 288 aaPredicted RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 PRSS37A4D1T9 235 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 CDK5Q00535 292 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 FABP5Q01469 135 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 HYAL1Q12794 435 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 DHRS13Q6UX07 377 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 LPAR2Q9HBW0 351 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 M0QZ24 198 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 DFFBO76075 338 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 KRASP01116 189 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 CELA2BP08218 269 aaPredicted RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 ISL1P61371 349 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 SRPXP78539 464 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 SLC35E4Q6ICL7 350 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 CMTM4Q8IZR5 234 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 CPEB3Q8NE35 698 aaKnown RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 OR5AP2Q8NGF4 316 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 NUP205Q92621 2012 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 DUS3LQ96G46 650 aaKnown RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 SMIM7Q9BQ49 75 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 PARD6AQ9NPB6 346 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 LRRC3CA6NJW4 275 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 TGOLN2O43493 480 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 CD1BP29016 333 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 PSMB2P49721 201 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 TCTN1Q2MV58 587 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 HSD17B13Q7Z5P4 300 aaPredicted RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 DTD1Q8TEA8 209 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 LIN7CQ9NUP9 197 aaKnown RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 AKR7A2O43488 359 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 CRYAAP02489 173 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 POU3F3P20264 500 aaPredicted RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 ABCD3P28288 659 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 NOVA1P51513 510 aaKnown RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 THEM4Q5T1C6 240 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 OR2L13Q8N349 312 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 SLC38A9Q8NBW4 561 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 OR4S1Q8NGB4 309 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 SLC25A43Q8WUT9 341 aaPredicted RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 TMEM140Q9NV12 185 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 STRAPQ9Y3F4 350 aaKnown RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
SPG11-203ENST00000535302 LY86O95711 162 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 EPHA2P29317 976 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 PPICP45877 212 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 FAM27D1Q5T7N8 215 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 BTNL3Q6UXE8 466 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 MFSD4AQ8N468 514 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 ZBTB44Q8NCP5 570 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 MORN4Q8NDC4 146 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
SPG11-203ENST00000535302 CLEC18AA5D8T8 446 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 SMIM18P0DKX4 95 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 HNRNPA3P51991 378 aaKnown RBP11.37□□□□□ -0.59
SPG11-203ENST00000535302 TFF2Q03403 129 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 LHFPL2Q6ZUX7 228 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 ZDHHC23Q8IYP9 409 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 ARIH2OSQ8N7S6 290 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 CLEC18CQ8NCF0 446 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 DEFB124Q8NES8 71 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 KTI12Q96EK9 354 aaPredicted RBP11.37□□□□□ -0.59
SPG11-203ENST00000535302 RAB18Q9NP72 206 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 CMC2Q9NRP2 79 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 LAMP3Q9UQV4 416 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 PHOX2AO14813 284 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 FABP1P07148 127 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 FCRL6Q6DN72 434 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 KIRREL2Q6UWL6 708 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 SLC51BQ86UW2 128 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 CNRIP1Q96F85 164 aaPredicted RBP11.37□□□□□ -0.59
SPG11-203ENST00000535302 CABLES2Q9BTV7 478 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 NUDT9Q9BW91 350 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 IL21Q9HBE4 155 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 MDC1Q14676 2089 aaKnown RBP11.37□□□□□ -0.59
SPG11-203ENST00000535302 METTL12A8MUP2 240 aa11.37□□□□□ -0.59
SPG11-203ENST00000535302 C3orf80F5H4A9 247 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms