RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 FBXL12Q9NXK8 326 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 IL36GQ9NZH8 169 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 GSKIPQ9P0R6 139 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 STOX2Q9P2F5 926 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 DHCR7Q9UBM7 475 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PRG3Q9Y2Y8 225 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 WDR81Q562E7 1941 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 KIF20BQ96Q89 1820 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 RIC1Q4ADV7 1423 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 FRG2CA6NGY1 282 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 C1orf196B1AJZ1 125 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 E9PQ18 207 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 CYB561D2O14569 222 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 TP53I11O14683 189 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 MRPS14O60783 128 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 GABARAPO95166 117 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 AP2A1O95782 977 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 LALBAP00709 142 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PIGRP01833 764 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 SLC35E2BP0CK96 405 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 SLC35E2P0CK97 266 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 CCL5P13501 91 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 MAS1LP35410 378 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ARR3P36575 388 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 NOVA1P51513 510 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 EFNB2P52799 333 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 FGF8P55075 233 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ELAVL2Q12926 359 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ARL6IP1Q15041 203 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 BSXQ3C1V8 233 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 N4BP2L1Q5TBK1 243 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 KHDRBS2Q5VWX1 349 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 LEMD1Q68G75 181 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 OR8G2PQ6IF36 304 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ASCL4Q6XD76 172 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 GCNT7Q6ZNI0 430 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 LANCL3Q6ZV70 420 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 YIPF7Q8N8F6 280 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 OR8J3Q8NGG0 315 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 OR1K1Q8NGR3 316 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 OR51A7Q8NH64 312 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 MAPK15Q8TD08 544 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ACOT11Q8WXI4 607 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 DLX4Q92988 240 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PSMG2Q969U7 264 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 VAT1Q99536 393 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 AIF1LQ9BQI0 150 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 DDA1Q9BW61 102 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 COMMD4Q9H0A8 199 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 SLC25A51Q9H1U9 297 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 NXF3Q9H4D5 531 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 NT5DC2Q9H857 520 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF430Q9H8G1 570 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 RNF122Q9H9V4 155 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 CACYBPQ9HB71 228 aaKnown RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ABCB9Q9NP78 766 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 INPP5EQ9NRR6 644 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF282Q9UDV7 671 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-210ENST00000534172 OR12D3Q9UGF7 316 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 ING4Q9UNL4 249 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 FLVCR2Q9UPI3 526 aa2.93□□□□□ -1.94
CSMD3-210ENST00000534172 MYH3P11055 1940 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 LAMA2P24043 3122 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 A0A087WYN8 130 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 IQCMA0A1B0GVH7 501 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 LRIT2A6NDA9 550 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF724A8MTY0 619 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF99A8MXY4 864 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 NPIPB9F8W1W9 429 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 BHLHE40O14503 412 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 EI24O14681 340 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 DUSP11O75319 330 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ATG12O94817 140 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 DIRAS1O95057 198 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CLDN9O95484 217 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 IGSF6O95976 241 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CA1P00915 261 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 SERPIND1P05546 499 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CT62P0C5K7 136 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 SCGB1A1P11684 91 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 AOC1P19801 751 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CNR1P21554 472 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 RPS3P23396 243 aaKnown RBP eCLIP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 IL12BP29460 328 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CALCRP30988 508 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 BDKRB1P46663 353 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 GYG1P46976 350 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 DUSP3P51452 185 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 PAX9P55771 341 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ERVK11-1P61568 191 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 IL5RAQ01344 420 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 KLRC3Q07444 240 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 PSG3Q16557 428 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 UNC50Q53HI1 259 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 KDM4DQ6B0I6 523 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ATRAIDQ6UW56 229 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 BTNL3Q6UXE8 466 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms