RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	UNC93A	Q86WB7	457 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	PPP1R27	Q86WC6	154 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.57	□□□□□ -1.84
ATM-223	ENST00000533979	VKORC1L1	Q8N0U8	176 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	ABHD12	Q8N2K0	398 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	VN1R2	Q8NFZ6	395 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	OR2L8	Q8NGY9	312 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	OR4Q3	Q8NH05	313 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	IFT81	Q8WYA0	676 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	RASL10A	Q92737	203 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	RMND5B	Q96G75	393 aa	Predicted RBP	3.57	□□□□□ -1.84
ATM-223	ENST00000533979	ATF6B	Q99941	703 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	FOXC2	Q99958	501 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	CALN1	Q9BXU9	219 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	SELENOI	Q9C0D9	397 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	SRR	Q9GZT4	340 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	COA1	Q9GZY4	146 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	FAM107B	Q9H098	131 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	ZBP1	Q9H171	429 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
ATM-223	ENST00000533979	KCNIP1	Q9NZI2	227 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	KLK13	Q9UKR3	277 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	ERGIC3	Q9Y282	383 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979		V9GYQ6	96 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	USP34	Q70CQ2	3546 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	WDFY4	Q6ZS81	3184 aa		3.57	□□□□□ -1.84
ATM-223	ENST00000533979	NAV2	Q8IVL1	2488 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ADAMTS9	Q9P2N4	1935 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	MROH7	Q68CQ1	1323 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	USP9X	Q93008	2570 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979		A0A0A6YYD5	115 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF816-ZNF321P	A0A0X1KG74	233 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	TMEM213	A2RRL7	107 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	DHRS7C	A6NNS2	312 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	EFCAB7	A8K855	629 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979		E5RI56	91 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979		K7EN84	100 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ERI3	O43414	337 aa	Known RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	GJB5	O95377	273 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	LDOC1	O95751	146 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	SERPINA6	P08185	405 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	MELTF	P08582	738 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	OR4E1	P0C645	316 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	OCM	P0CE72	109 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	SLC35E2B	P0CK96	405 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	IL9	P15248	144 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	IGLL1	P15814	213 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	CSNK2A2	P19784	350 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ATP6V1B2	P21281	511 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	CNR1	P21554	472 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	VDAC1	P21796	283 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	GATA2	P23769	480 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	GTF2H1	P32780	548 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	PCK1	P35558	622 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	KIR2DS4	P43632	304 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	PRLHR	P49683	370 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	KLK7	P49862	253 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	VSNL1	P62760	191 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF92	Q03936	586 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	C2orf80	Q0P641	193 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	NAB1	Q13506	487 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF726P1	Q15940	193 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	QRICH1	Q2TAL8	776 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	CCDC58	Q4VC31	144 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	YIF1B	Q5BJH7	314 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF506	Q5JVG8	444 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	MFSD14C	Q5VZR4	134 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	OLFML2A	Q68BL7	652 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	C3orf33	Q6P1S2	294 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	CD300LG	Q6UXG3	332 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	PLEKHG7	Q6ZR37	379 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	PRSS41	Q7RTY9	318 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	SH2D6	Q7Z4S9	175 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	TMEM135	Q86UB9	458 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF786	Q8N393	782 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	C19orf18	Q8NEA5	215 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	DUSP18	Q8NEJ0	188 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	OR6K6	Q8NGW6	343 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	DTD1	Q8TEA8	209 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	PYDC1	Q8WXC3	89 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	TMEM54	Q969K7	222 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF75A	Q96N20	296 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	COL21A1	Q96P44	957 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	C7orf50	Q9BRJ6	194 aa	Known RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	NAT9	Q9BTE0	207 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	SLC38A1	Q9H2H9	487 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	OR51B6	Q9H340	312 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	UBE2Z	Q9H832	354 aa	Predicted RBP	3.56	□□□□□ -1.84
ATM-223	ENST00000533979	C19orf12	Q9NSK7	152 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	EXD2	Q9NVH0	621 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ARMC1	Q9NVT9	282 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	MAT2B	Q9NZL9	334 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	MUTYH	Q9UIF7	546 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	RAB23	Q9ULC3	237 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	CSAG2	Q9Y5P2	127 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	MTCH2	Q9Y6C9	303 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979		V9GY05	133 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	AGRN	O00468	2067 aa		3.56	□□□□□ -1.84

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