RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ZNF404Q494X3 552 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 KLHL12Q53G59 568 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 ARMCX4Q5H9R4 360 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 LCN1P1Q5VSP4 162 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 LYPD4Q6UWN0 246 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 KLBQ86Z14 1044 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 PROKR2Q8NFJ6 384 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 BPIFB6Q8NFQ5 453 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 Q8TCH9 128 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF799Q96GE5 643 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 TMEM246Q9BRR3 403 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 SSBP3Q9BWW4 388 aaPredicted RBP9.46□□□□□ -0.9
CLCF1-202ENST00000533438 FKBP14Q9NWM8 211 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 SCN3BQ9NY72 215 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 CNOT2Q9NZN8 540 aaKnown RBP9.46□□□□□ -0.9
CLCF1-202ENST00000533438 MIOXQ9UGB7 285 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 PSORS1C1Q9UIG5 152 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 NUP50Q9UKX7 468 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 BLOC1S6Q9UL45 172 aa9.46□□□□□ -0.9
CLCF1-202ENST00000533438 IGHV3-64DA0A0J9YX35 117 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 TVP23AA6NH52 213 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 XPNPEP2O43895 674 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 FAM20BO75063 409 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 TNFAIP8O95379 198 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 LCATP04180 440 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 PPIAL4GP0DN37 164 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 PIPP12273 146 aaPredicted RBP9.45□□□□□ -0.9
CLCF1-202ENST00000533438 RPS2P15880 293 aaKnown RBP9.45□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF823P16415 610 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 GSTT1P30711 240 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 CD80P33681 288 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 MTNR1AP48039 350 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 GABARAPL2P60520 117 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 RPS7P62081 194 aaKnown RBP9.45□□□□□ -0.9
CLCF1-202ENST00000533438 SLC35A2P78381 396 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 RAB40BQ12829 278 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 POU4F2Q12837 409 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 MALLQ13021 153 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 PCK2Q16822 640 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 SNAI3Q3KNW1 292 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 KCTD21Q4G0X4 260 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 FAM201AQ5SY85 155 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 PGAP1Q75T13 922 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 DOK3Q7L591 496 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 C1orf87Q8N0U7 546 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 OR51L1Q8NGJ5 315 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 GGHQ92820 318 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 GCDHQ92947 438 aaPredicted RBP9.45□□□□□ -0.9
CLCF1-202ENST00000533438 ERGIC1Q969X5 290 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 ZMYND19Q96E35 227 aaPredicted RBP9.45□□□□□ -0.9
CLCF1-202ENST00000533438 RNFT2Q96EX2 444 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 MRI1Q9BV20 369 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 DUSP21Q9H596 190 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF696Q9H7X3 374 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 MARCH7Q9H992 704 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 AMBNQ9NP70 447 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF69Q9UC07 566 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 OR5V1Q9UGF6 321 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 MYRFQ9Y2G1 1151 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 TPRKBQ9Y3C4 175 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 COMMD3-BMI1R4GMX3 469 aa9.45□□□□□ -0.9
CLCF1-202ENST00000533438 TGP01266 2768 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 IGHV2-70DA0A0C4DH43 119 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 IRGMA1A4Y4 181 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 C5orf63A6NC05 138 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 EFCAB10A6NFE3 127 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 LRRC30A6NM36 301 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 PTBP3O95758 552 aaKnown RBP9.44□□□□□ -0.9
CLCF1-202ENST00000533438 GNB2P62879 340 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF92Q03936 586 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 MPPED2Q15777 294 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 KLHL22Q53GT1 634 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 DRAM2Q6UX65 266 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 DCXRQ7Z4W1 244 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 TIGD4Q8IY51 512 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 BCL6BQ8N143 479 aaPredicted RBP9.44□□□□□ -0.9
CLCF1-202ENST00000533438 SIGLECL1Q8N7X8 197 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 OR6K6Q8NGW6 343 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 SPTSSAQ969W0 71 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 LGALS12Q96DT0 336 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 NEIL1Q96FI4 390 aaPredicted RBP9.44□□□□□ -0.9
CLCF1-202ENST00000533438 C1orf147Q96MC9 270 aaPredicted RBP9.44□□□□□ -0.9
CLCF1-202ENST00000533438 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
CLCF1-202ENST00000533438 SLC22A4Q9H015 551 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 ADGRL4Q9HBW9 690 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 PAK1IP1Q9NWT1 392 aaPredicted RBP9.44□□□□□ -0.9
CLCF1-202ENST00000533438 EXOGQ9Y2C4 368 aaKnown RBP9.44□□□□□ -0.9
CLCF1-202ENST00000533438 PPIAL4AQ9Y536 164 aa9.44□□□□□ -0.9
CLCF1-202ENST00000533438 CD300LBA8K4G0 201 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 J3QRE1 110 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 GMDSO60547 372 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 MRPS14O60783 128 aaKnown RBP9.43□□□□□ -0.9
CLCF1-202ENST00000533438 PLATP00750 562 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 LYNP07948 512 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 CA6P23280 308 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 PSMB10P40306 273 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 ENTPD1P49961 510 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 OR8G1Q15617 311 aa9.43□□□□□ -0.9
CLCF1-202ENST00000533438 AWAT1Q58HT5 328 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms