RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 hCG_38984A0A1B0GV85 526 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 A0A1B0GVI7 797 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 A0A1B0GW55 424 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 M0QZ24 198 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 GNGT2O14610 69 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 TIMM23O14925 209 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 GYG2O15488 501 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 TBX1O43435 398 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 TIPRLO75663 272 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 CLPXO76031 633 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 SOX14O95416 240 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4L2P0CJ85 424 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4L3P0CJ86 424 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4L4P0CJ87 422 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4L5P0CJ88 424 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4L6P0CJ89 424 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4L7P0CJ90 424 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 RAP2AP10114 183 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 CLUP10909 449 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 GRK5P34947 590 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 SLC15A1P46059 708 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 BLVRAP53004 296 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 PROK1P58294 105 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 CSNK2BP67870 215 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 POU4F2Q12837 409 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 PPP1R8Q12972 351 aaKnown RBP9.35□□□□□ -0.91
VPS28-214ENST00000531032 WDR38Q5JTN6 314 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 LINC01590Q5TEZ4 76 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4L9Q6RFH8 374 aaPredicted RBP9.35□□□□□ -0.91
VPS28-214ENST00000531032 METAP1DQ6UB28 335 aaPredicted RBP9.35□□□□□ -0.91
VPS28-214ENST00000531032 WDR82Q6UXN9 313 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DPY19L4Q7Z388 723 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 VMO1Q7Z5L0 202 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 FGFRL1Q8N441 504 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 SCCPDHQ8NBX0 429 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 LY6G5BQ8NDX9 201 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 OR2T33Q8NG76 320 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 OR1M1Q8NGA1 313 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 OR10G2Q8NGC3 310 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 OR6K6Q8NGW6 343 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 OR4Q3Q8NH05 313 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 LINC01006Q8NI28 216 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 TEX47Q8TBZ9 253 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 RNF133Q8WVZ7 376 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 SGK3Q96BR1 496 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 C12orf43Q96C57 262 aaKnown RBP9.35□□□□□ -0.91
VPS28-214ENST00000531032 REEP6Q96HR9 211 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 TSSK6Q9BXA6 273 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 TLNRD1Q9H1K6 362 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 C1orf21Q9H246 121 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 MMP27Q9H306 513 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 DUX4Q9UBX2 424 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 N6AMT1Q9Y5N5 214 aa9.35□□□□□ -0.91
VPS28-214ENST00000531032 GPR37O15354 613 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 E2F6O75461 281 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 CST1P01037 141 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 IFNGP01579 166 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 ANXA2P07355 339 aaKnown RBP9.34□□□□□ -0.91
VPS28-214ENST00000531032 T-ENOLP0DO92 83 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 CFL1P23528 166 aaKnown RBP9.34□□□□□ -0.91
VPS28-214ENST00000531032 ELF3P78545 371 aaPredicted RBP9.34□□□□□ -0.91
VPS28-214ENST00000531032 MS4A2Q01362 244 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 EIF2B1Q14232 305 aaKnown RBP9.34□□□□□ -0.91
VPS28-214ENST00000531032 FLOT2Q14254 428 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 TIGD6Q17RP2 521 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 MICAQ29983 383 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 KLHL12Q53G59 568 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 SLC36A1Q7Z2H8 476 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 SPATA24Q86W54 205 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 PDZD9Q8IXQ8 264 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 FAM216BQ8N7L0 139 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 OR52H1Q8NGJ2 320 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 CCL13Q99616 98 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 DGCR6LQ9BY27 220 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 DPAGT1Q9H3H5 408 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 YY1AP1Q9H869 796 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 SP140LQ9H930 580 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 ARMC1Q9NVT9 282 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 TAS2R1Q9NYW7 299 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 ZNF319Q9P2F9 582 aa9.34□□□□□ -0.91
VPS28-214ENST00000531032 CMYA5Q8N3K9 4069 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 AQP12BA6NM10 295 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 RIIAD1A6NNX1 92 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 H3BN98 237 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 ACOT8O14734 319 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 APOC1P02654 83 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 ZNF3P17036 446 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 HOXB6P17509 224 aaKnown RBP9.33□□□□□ -0.92
VPS28-214ENST00000531032 AMY2BP19961 511 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 HSD11B1P28845 292 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 OPRL1P41146 370 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 NAA10P41227 235 aaPredicted RBP9.33□□□□□ -0.92
VPS28-214ENST00000531032 TGM4P49221 684 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 GSK3AP49840 483 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 ZNF121P58317 390 aaPredicted RBP9.33□□□□□ -0.92
VPS28-214ENST00000531032 GK3PQ14409 553 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 TAF9Q16594 264 aa9.33□□□□□ -0.92
VPS28-214ENST00000531032 ATPAF1Q5TC12 328 aaPredicted RBP9.33□□□□□ -0.92
VPS28-214ENST00000531032 STUMQ69YW2 141 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms