RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	FGL1	Q08830	312 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF345	Q14585	488 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	LY6G6F	Q5SQ64	297 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	STEAP1B	Q6NZ63	245 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	PCSK4	Q6UW60	755 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	GABRG1	Q8N1C3	465 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	KCNRG	Q8N5I3	272 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF676	Q8N7Q3	588 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	DNAJA3	Q96EY1	480 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	UCN2	Q96RP3	112 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	SRXN1	Q9BYN0	137 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	SCPEP1	Q9HB40	452 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	TMEM138	Q9NPI0	162 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	GLRX2	Q9NS18	164 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	ASF1B	Q9NVP2	202 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	GRHPR	Q9UBQ7	328 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	LAMP5	Q9UJQ1	280 aa		12.83	□□□□□ -0.36
NR1H3-231	ENST00000529540	TPR	P12270	2363 aa	Known RBP	12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	TRAV18	A0A075B6X5	111 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	FAM171A2	A8MVW0	826 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	PRRG2	O14669	202 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	SMAD9	O15198	467 aa	Known RBP	12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	CYTIP	O60759	359 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	NR2C1	P13056	603 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	ALOX5AP	P20292	161 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	KIR3DL2	P43630	455 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	POU3F4	P49335	361 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	P2RY4	P51582	365 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	EFNB2	P52799	333 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	CTXN1	P60606	82 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	GUCA2A	Q02747	115 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	ABLIM2	Q6H8Q1	611 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	GFRAL	Q6UXV0	394 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	MOB3C	Q70IA8	216 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	BIVM	Q86UB2	503 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	TMEM17	Q86X19	198 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	PRSS35	Q8N3Z0	413 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	CLRN3	Q8NCR9	226 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	FAM57A	Q8TBR7	257 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	RNF128	Q8TEB7	428 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	TMEM106A	Q96A25	262 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	PHYHIPL	Q96FC7	376 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	RNF122	Q9H9V4	155 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	CALHM2	Q9HA72	323 aa		12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	BARX1	Q9HBU1	254 aa	Predicted RBP	12.82	□□□□□ -0.36
NR1H3-231	ENST00000529540	PKD1L2	Q7Z442	2459 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540		A6NIZ1	184 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLC22A20	A6NK97	555 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	C11orf98	E9PRG8	122 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540		H0YC42	278 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	MS4A18	H0YCH9	400 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR2F2	O95006	317 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	CD37	P11049	281 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	UBE2M	P61081	183 aa	Known RBP	12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	RAP1B	P61224	184 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	RAP1A	P62834	184 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	HSF1	Q00613	529 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	FLI1	Q01543	452 aa	Predicted RBP	12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR2F1	Q13607	317 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	MS4A18	Q3C1V0	323 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	C4orf46	Q504U0	113 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	CLVS2	Q5SYC1	327 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	EEF1A1P5	Q5VTE0	462 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR2A2	Q6IF42	318 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	C11orf88	Q6PI97	169 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	P4HA3	Q7Z4N8	544 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	ADGRE4P	Q86SQ3	457 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	MCEMP1	Q8IX19	187 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR51D1	Q8NGF3	324 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR10AC1	Q8NH08	325 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	CPT1C	Q8TCG5	803 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLCO5A1	Q9H2Y9	848 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	TXNIP	Q9H3M7	391 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	POFUT1	Q9H488	388 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	IKZF2	Q9UKS7	526 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	FREM3	P0C091	2139 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	MPDZ	O75970	2070 aa		12.81	□□□□□ -0.36
NR1H3-231	ENST00000529540	TMEM82	A0PJX8	343 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	XKRY	O14609	159 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	BCL2L11	O43521	198 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	SPDEF	O95238	335 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	REN	P00797	406 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	CD3D	P04234	171 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	F13B	P05160	661 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR4E1	P0C645	316 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	CASP6	P55212	293 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	RPL27	P61353	136 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	POU3F1	Q03052	451 aa	Predicted RBP	12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	MELK	Q14680	651 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLC17A1	Q14916	467 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	GLT8D1	Q68CQ7	371 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	ATRAID	Q6UW56	229 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	ST6GALNAC3	Q8NDV1	305 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR5M8	Q8NGP6	311 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	WNT2B	Q93097	391 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	RELT	Q969Z4	430 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	FAM3D	Q96BQ1	224 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms