RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 OSMP13725 252 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 GRK5P34947 590 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 RBMXP38159 391 aaKnown RBP11.84□□□□□ -0.51
CAPN1-212ENST00000527887 PRKXP51817 358 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 CSNK2BP67870 215 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 BAMBIQ13145 260 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 MPPED2Q15777 294 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 GLYATL3Q5SZD4 288 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF841Q6ZN19 808 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 THAP5Q7Z6K1 395 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 OR52H1Q8NGJ2 320 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 OR6K6Q8NGW6 343 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 TEX47Q8TBZ9 253 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 FBLIM1Q8WUP2 373 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 SLC25A28Q96A46 364 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 CNBD2Q96M20 576 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 ZNF696Q9H7X3 374 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 BATF3Q9NR55 127 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 UFSP2Q9NUQ7 469 aa11.84□□□□□ -0.51
CAPN1-212ENST00000527887 IGHV3-64DA0A0J9YX35 117 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 ANKRD30BLA7E2S9 258 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 GLCEO94923 617 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 SOX14O95416 240 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 LYNP07948 512 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 RPSAP08865 295 aaKnown RBP11.83□□□□□ -0.52
CAPN1-212ENST00000527887 PAICSP22234 425 aaKnown RBP11.83□□□□□ -0.52
CAPN1-212ENST00000527887 HSD11B1P28845 292 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 CXCR4P61073 352 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 KCTD21Q4G0X4 260 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 AWAT1Q58HT5 328 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 FAM201AQ5SY85 155 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 LINC01590Q5TEZ4 76 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 ZNF691Q5VV52 312 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 PRAMEF6Q5VXH4 476 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 OR2AE1Q8NHA4 323 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 RNF133Q8WVZ7 376 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 TRUB1Q8WWH5 349 aaKnown RBP11.83□□□□□ -0.52
CAPN1-212ENST00000527887 INTS14Q96SY0 518 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 NIPSNAP1Q9BPW8 284 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 MARCH7Q9H992 704 aa11.83□□□□□ -0.52
CAPN1-212ENST00000527887 OOEPA6NGQ2 149 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 DNAJC9-AS1A6NH13 148 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 H3BN98 237 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 MPZL2O60487 215 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 HMGN1P05114 100 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 GYPBP06028 91 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
CAPN1-212ENST00000527887 GNAO1P09471 354 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 GSTT1P30711 240 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 CRISP1P54107 249 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 PRSS12P56730 875 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 ISL1P61371 349 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 EIF2B1Q14232 305 aaKnown RBP11.82□□□□□ -0.52
CAPN1-212ENST00000527887 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-212ENST00000527887 RBM48Q5RL73 367 aaKnown RBP11.82□□□□□ -0.52
CAPN1-212ENST00000527887 LYPD4Q6UWN0 246 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 FTMTQ8N4E7 242 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 PNLDC1Q8NA58 520 aaKnown RBP11.82□□□□□ -0.52
CAPN1-212ENST00000527887 OR56B2PQ8NGI1 322 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 ITFG2Q969R8 447 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 ZNF747Q9BV97 191 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 PRDM13Q9H4Q3 707 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 RGCCQ9H4X1 137 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 MYRFQ9Y2G1 1151 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 GMPPBQ9Y5P6 360 aa11.82□□□□□ -0.52
CAPN1-212ENST00000527887 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 POM121CA8CG34 1229 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 P2RY10O00398 339 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 TNFRSF13BO14836 293 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-212ENST00000527887 MITFO75030 526 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-212ENST00000527887 ECDO95905 644 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-212ENST00000527887 LHBP01229 141 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 ANXA2P07355 339 aaKnown RBP11.81□□□□□ -0.52
CAPN1-212ENST00000527887 GRPP07492 148 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 CCDC159P0C7I6 412 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 CLUP10909 449 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 SLC2A1P11166 492 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 PSKH1P11801 424 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 CX3CR1P49238 355 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 FAM3AP98173 230 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 OR8B8Q15620 311 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 TIGD6Q17RP2 521 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 SHISA2Q6UWI4 295 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 LYPD2Q6UXB3 125 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 SLC16A9Q7RTY1 509 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 DPY19L4Q7Z388 723 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 BCL6BQ8N143 479 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-212ENST00000527887 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 CSNK2A3Q8NEV1 391 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 OR6N2Q8NGY6 317 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 OR8S1Q8NH09 359 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 SGK3Q96BR1 496 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 DMRTB1Q96MA1 342 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-212ENST00000527887 ABHD6Q9BV23 337 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 TEX12Q9BXU0 123 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 OR10A2Q9H208 303 aa11.81□□□□□ -0.52
CAPN1-212ENST00000527887 RIBC2Q9H4K1 309 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms