RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 IL19Q9UHD0 177 aa10.97□□□□□ -0.65
SMPD1-202ENST00000526280 EXOSC1Q9Y3B2 195 aaKnown RBP10.97□□□□□ -0.65
SMPD1-202ENST00000526280 TPRKBQ9Y3C4 175 aa10.97□□□□□ -0.65
SMPD1-202ENST00000526280 TEP1Q99973 2627 aaKnown RBP10.97□□□□□ -0.65
SMPD1-202ENST00000526280 ZNF469Q96JG9 3925 aaPredicted RBP10.97□□□□□ -0.65
SMPD1-202ENST00000526280 F8P00451 2351 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 IGHV4-30-2A0A087WSY4 118 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 A0A1B0GTI1 187 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 ANKRD30BLA7E2S9 258 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 LYNX1G3V0Z9 82 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 NDUFS8O00217 210 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 GMDSO60547 372 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 HTR1AP08908 422 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 LYNX1P0DP58 116 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 MYL12AP19105 171 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 MAP2K3P46734 347 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 NANOS3P60323 173 aaKnown RBP10.96□□□□□ -0.65
SMPD1-202ENST00000526280 WDR38Q5JTN6 314 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 GPR107Q5VW38 600 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 Q6ZSR3 168 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 AHSA2Q719I0 299 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 KRT74Q7RTS7 529 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 KLBQ86Z14 1044 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 ZNF540Q8NDQ6 660 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 OR10AD1Q8NGE0 317 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 OR13F1Q8NGS4 319 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 ZNF420Q8TAQ5 688 aaPredicted RBP10.96□□□□□ -0.65
SMPD1-202ENST00000526280 SGCDQ92629 289 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 YIPF5Q969M3 257 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 OR2V2Q96R30 315 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 DLL4Q9NR61 685 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 SCN3BQ9NY72 215 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 FRRS1LQ9P0K9 344 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 CLEC2DQ9UHP7 191 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 CAB39Q9Y376 341 aaPredicted RBP10.96□□□□□ -0.65
SMPD1-202ENST00000526280 NOP16Q9Y3C1 178 aaKnown RBP10.96□□□□□ -0.65
SMPD1-202ENST00000526280 RHBDD3Q9Y3P4 386 aa10.96□□□□□ -0.65
SMPD1-202ENST00000526280 HIVEP1P15822 2718 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 IGHV1-69-2A0A0G2JMI3 117 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 TRIM64BA6NI03 449 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 VWC2LB2RUY7 222 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 PTGES3LE9PB15 166 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 F5H5P2 479 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 P2RY10O00398 339 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CDC14BO60729 498 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 MTRF1O75570 445 aaKnown RBP10.95□□□□□ -0.66
SMPD1-202ENST00000526280 RP2O75695 350 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 DHRS3O75911 302 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CST4P01036 141 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 TNFRSF1AP19438 455 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 ACHEP22303 614 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CCL1P22362 96 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 GIFP27352 417 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 C21orf33P30042 268 aaPredicted RBP10.95□□□□□ -0.66
SMPD1-202ENST00000526280 KIR3DL2P43630 455 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CCR9P51686 369 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 MRPL28Q13084 256 aaKnown RBP10.95□□□□□ -0.66
SMPD1-202ENST00000526280 MAB21L1Q13394 359 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 RIN1Q13671 783 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 OR8G1Q15617 311 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CARTPTQ16568 116 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 XAF1Q6GPH4 301 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 TMPRSS11AQ6ZMR5 421 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 COMMD2Q86X83 199 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 STX19Q8N4C7 294 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 FTMTQ8N4E7 242 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 KLHL36Q8N4N3 616 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CELF2-AS1Q8N7Q2 184 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 SEMA6DQ8NFY4 1073 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 HAVCR2Q8TDQ0 301 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 ITLN1Q8WWA0 313 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 C12orf43Q96C57 262 aaKnown RBP10.95□□□□□ -0.66
SMPD1-202ENST00000526280 FAM71F1Q96KD3 344 aaPredicted RBP10.95□□□□□ -0.66
SMPD1-202ENST00000526280 MEGF10Q96KG7 1140 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 DUSP21Q9H596 190 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CHODLQ9H9P2 273 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 CHCHD3Q9NX63 227 aaKnown RBP10.95□□□□□ -0.66
SMPD1-202ENST00000526280 ERVK-18Q9QC07 812 aa10.95□□□□□ -0.66
SMPD1-202ENST00000526280 FLNAP21333 2647 aaKnown RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 OR4C45A6NMZ5 311 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 E9PI62 339 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 MRPS14O60783 128 aaKnown RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 ISG15P05161 165 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 CDK1P06493 297 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 UBCP0CG48 685 aaKnown RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 CD200P41217 278 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 TGM4P49221 684 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 SRP9P49458 86 aaKnown RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 GBX2P52951 348 aaPredicted RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 TMEM33P57088 247 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 SLC35A2P78381 396 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 RIPPLY1Q0D2K3 151 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 ALKBH1Q13686 389 aaKnown RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 ODF4Q2M2E3 257 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 HFEQ30201 348 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 ZBTB37Q5TC79 503 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 OR2G6Q5TZ20 316 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 DOK3Q7L591 496 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 RDH10Q8IZV5 341 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 SPERTQ8NA61 448 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms