RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 TBX15Q96SF7 602 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 HDAC8Q9BY41 377 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 SLC25A22Q9H936 323 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 FBXO4Q9UKT5 387 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 PAM16Q9Y3D7 125 aa12.4□□□□□ -0.42
LRRK1-202ENST00000525284 SLC2A10O95528 541 aa12.4□□□□□ -0.43
LRRK1-202ENST00000525284 KRASP01116 189 aa12.4□□□□□ -0.43
LRRK1-202ENST00000525284 ADPRHP54922 357 aa12.4□□□□□ -0.43
LRRK1-202ENST00000525284 OR52N5Q8NH56 324 aa12.4□□□□□ -0.43
LRRK1-202ENST00000525284 ZCCHC14Q8WYQ9 949 aaKnown RBP12.4□□□□□ -0.43
LRRK1-202ENST00000525284 DUOX1Q9NRD9 1551 aa12.4□□□□□ -0.43
LRRK1-202ENST00000525284 PRLHRP49683 370 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 TPBGQ13641 420 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 PAQR6Q6TCH4 344 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 TTC9BQ8N6N2 239 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 GALMQ96C23 342 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 ABHD14AQ9BUJ0 271 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 ONECUT1Q9UBC0 465 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 LMX1BO60663 402 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 FURINP09958 794 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 CD38P28907 300 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 CYB561P49447 251 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 SPINK9Q5DT21 86 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 UBALD1Q8TB05 177 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 NAT6Q93015 286 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 MCHR2Q969V1 340 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 GLIPR2Q9H4G4 154 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 PARP4Q9UKK3 1724 aaKnown RBP12.39□□□□□ -0.43
LRRK1-202ENST00000525284 M0R082 166 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 TSPAN13O95857 204 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 CYC1P08574 325 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
LRRK1-202ENST00000525284 NMUP48645 174 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 GPNMBQ14956 572 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 TRILQ7L0X0 811 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 BADQ92934 168 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 IGHV3-20A0A0C4DH32 117 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 SNRPGP15A8MWD9 76 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 CD99P14209 185 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 GNG10P50151 68 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 INSM1Q01101 510 aaPredicted RBP12.39□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF788Q6ZQV5 615 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 NARFLQ9H6Q4 476 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 UQCC1Q9NVA1 299 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
LRRK1-202ENST00000525284 CORTO00230 105 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 GJB3O75712 270 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 MT-ATP6P00846 226 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 CTSLP07711 333 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 C19orf57Q0VDD7 668 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 SIX1Q15475 284 aaPredicted RBP12.39□□□□□ -0.43
LRRK1-202ENST00000525284 OTPQ5XKR4 325 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 ROBO4Q8WZ75 1007 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 SLC7A10Q9NS82 523 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 C20orf141Q9NUB4 165 aa12.39□□□□□ -0.43
LRRK1-202ENST00000525284 PLEKHB1Q9UF11 243 aaPredicted RBP12.39□□□□□ -0.43
LRRK1-202ENST00000525284 M0R135 149 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 WNT3P56703 355 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 SYT14P1Q58G82 188 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF628Q5EBL2 1059 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 C11orf87Q6NUJ2 197 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 ETFBKMTQ8IXQ9 262 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 LRRC15Q8TF66 581 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF799Q96GE5 643 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 NRXN3Q9Y4C0 1643 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 SPRY1O43609 319 aaPredicted RBP12.38□□□□□ -0.43
LRRK1-202ENST00000525284 AVPR2P30518 371 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 NKAIN4Q8IVV8 208 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 NAA60Q9H7X0 242 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 ABCC6O95255 1503 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 GPX5O75715 221 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 C21orf58P58505 322 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 SHHQ15465 462 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 SP6Q3SY56 376 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 VMA21Q3ZAQ7 101 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 PLA1AQ53H76 456 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 RBPMS2Q6ZRY4 209 aaKnown RBP12.38□□□□□ -0.43
LRRK1-202ENST00000525284 CCDC190Q86UF4 302 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 EXD3Q8N9H8 876 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 MYOZ3Q8TDC0 251 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 DUSP21Q9H596 190 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 IVDP26440 423 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 PRSS36Q5K4E3 855 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 ZBTB37Q5TC79 503 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 OR1L6Q8NGR2 347 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 MRPS2Q9Y399 296 aaKnown RBP12.38□□□□□ -0.43
LRRK1-202ENST00000525284 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 MFNGO00587 321 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 CA2P00918 260 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 TM4SF1P30408 202 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 SLC6A1P30531 599 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 AMMECR1LQ6DCA0 310 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 REC114Q7Z4M0 266 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 TMEM179BQ7Z7N9 219 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms