RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	FAS	P25445	335 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	TGFBR2	P37173	567 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	ERF	P50548	548 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	AP2S1	P53680	142 aa	Predicted RBP	4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	RPS4X	P62701	263 aa	Known RBP	4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	MRPS22	P82650	360 aa	Known RBP	4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	MS4A2	Q01362	244 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	OC90	Q02509	493 aa	Predicted RBP	4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	BCL2L1	Q07817	233 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	RBBP4	Q09028	425 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	MAD2L1	Q13257	205 aa	Predicted RBP	4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	GAB1	Q13480	694 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	PHKG1	Q16816	387 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	MEP1A	Q16819	746 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZSWIM7	Q19AV6	140 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	C2orf68	Q2NKX9	166 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	CNPY1	Q3B7I2	92 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	GLYR1	Q49A26	553 aa	Predicted RBP	4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	UNC50	Q53HI1	259 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	HES5	Q5TA89	166 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	REP15	Q6BDI9	236 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	TMEM65	Q6PI78	240 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	UGT2A3	Q6UWM9	527 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	C19orf35	Q6ZS72	473 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	SMIM15	Q7Z3B0	74 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	AMIGO1	Q86WK6	493 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	GPSM1	Q86YR5	675 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	CYP4Z2P	Q8N1L4	340 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	SPATA6L	Q8N4H0	392 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	PARP16	Q8N5Y8	322 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	TMEM156	Q8N614	296 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	SLC5A8	Q8N695	610 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR4E2	Q8NGC2	313 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR4D5	Q8NGN0	318 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR13J1	Q8NGT2	312 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR52E5	Q8NH55	327 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	SPPL2A	Q8TCT8	520 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	BLOC1S5	Q8TDH9	187 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	TMEM239	Q8WW34	195 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	SCRN2	Q96FV2	425 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	IL4I1	Q96RQ9	567 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	TRIB3	Q96RU7	358 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	IFT27	Q9BW83	186 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	ALG9	Q9H6U8	611 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	KIR3DX1	Q9H7L2	352 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	USE1	Q9NZ43	259 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	CCDC167	Q9P0B6	97 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR14J1	Q9UGF5	321 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	FIS1	Q9Y3D6	152 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	A3GALT2	U3KPV4	340 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636	DNAH17	Q9UFH2	4485 aa		4.37	□□□□□ -1.71
PABPC1-223	ENST00000523636		A0A087WXM4	84 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636		A0A1W2PP18	115 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636		A0A1W2PQL4	384 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	LRRC30	A6NM36	301 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	FAM166B	A8MTA8	275 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CLIC1	O00299	241 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CASK	O14936	926 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SCO2	O43819	266 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	AIRE	O43918	545 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	ATP6AP2	O75787	350 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	GLS	O94925	669 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	PPP1R3D	O95685	299 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	PMCH	P20382	165 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	GPX3	P22352	226 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SERPINB1	P30740	379 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	RGS6	P49758	472 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CDKN2D	P55273	166 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CLDN15	P56746	228 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	MAX	P61244	160 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	FOXF2	Q12947	444 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	COX19	Q49B96	90 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	MTX3	Q5HYI7	312 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	NSUN5P2	Q63ZY6	315 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZNF562	Q6V9R5	426 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	LANCL3	Q6ZV70	420 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	GLT6D1	Q7Z4J2	308 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	AMIGO2	Q86SJ2	522 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	TMEM217	Q8N7C4	229 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZDHHC22	Q8N966	263 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR5AU1	Q8NGC0	362 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR4N2	Q8NGD1	307 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR52N1	Q8NH53	320 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	MRAP	Q8TCY5	172 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	NAT14	Q8WUY8	206 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	TWIST2	Q8WVJ9	160 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	RNF133	Q8WVZ7	376 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	AP3S1	Q92572	193 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	GTF3A	Q92664	365 aa	Known RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	2e-16	■□□□□ 8.9
PABPC1-223	ENST00000523636	LRRC58	Q96CX6	371 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CENPN	Q96H22	339 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SGK494	Q96LW2	274 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZNF597	Q96LX8	424 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CNBD2	Q96M20	576 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZNF582	Q96NG8	517 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	TSSK2	Q96PF2	358 aa		4.36	□□□□□ -1.71

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