RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PRSS22Q9GZN4 317 aa9.41□□□□□ -0.9
SDCBP-211ENST00000523441 MUC13Q9H3R2 512 aa9.41□□□□□ -0.9
SDCBP-211ENST00000523441 PNRC2Q9NPJ4 139 aaKnown RBP9.41□□□□□ -0.9
SDCBP-211ENST00000523441 ABCB10Q9NRK6 738 aa9.41□□□□□ -0.9
SDCBP-211ENST00000523441 HAO2Q9NYQ3 351 aa9.41□□□□□ -0.9
SDCBP-211ENST00000523441 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
SDCBP-211ENST00000523441 IGLV1-36A0A0B4J1U3 117 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 TVP23AA6NH52 213 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 M0R1W7 72 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 RENP00797 406 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 FAHP16930 419 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 KDELR2P33947 212 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 NAA10P41227 235 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-211ENST00000523441 TGM4P49221 684 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 RPS6KA3P51812 740 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 BLCAPP62952 87 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 CYLC2Q14093 348 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-211ENST00000523441 CNN3Q15417 329 aaKnown RBP9.4□□□□□ -0.9
SDCBP-211ENST00000523441 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 KRTAP27-1Q3LI81 207 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 FGD3Q5JSP0 725 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 STUMQ69YW2 141 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 PGM2L1Q6PCE3 622 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-211ENST00000523441 CPLX4Q7Z7G2 160 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 ADCK1Q86TW2 530 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 DYNAPQ8N1N2 210 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 WFDC9Q8NEX5 89 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 PIFOQ8TCI5 191 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 DPF1Q92782 380 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 RPL3LQ92901 407 aaKnown RBP9.4□□□□□ -0.9
SDCBP-211ENST00000523441 RSRC1Q96IZ7 334 aaKnown RBP9.4□□□□□ -0.9
SDCBP-211ENST00000523441 COPS4Q9BT78 406 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 MEGF9Q9H1U4 602 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 RABEP2Q9H5N1 569 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 RNPEPL1Q9HAU8 725 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 NRIP3Q9NQ35 241 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 CENPMQ9NSP4 180 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 GMPR2Q9P2T1 348 aaKnown RBP9.4□□□□□ -0.9
SDCBP-211ENST00000523441 SIGLEC7Q9Y286 467 aa9.4□□□□□ -0.9
SDCBP-211ENST00000523441 MEX3AA1L020 520 aaKnown RBP9.39□□□□□ -0.91
SDCBP-211ENST00000523441 HTR3EA5X5Y0 456 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 ZNF823P16415 610 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 JUNBP17275 347 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-211ENST00000523441 PYCR1P32322 319 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 GNALP38405 381 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 SLC7A2P52569 658 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 SLC36A3Q495N2 470 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 LYPD4Q6UWN0 246 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 TMPRSS11FQ6ZWK6 438 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 FKBP9P1Q75LS8 142 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 CENPVQ7Z7K6 275 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-211ENST00000523441 RNF113BQ8IZP6 322 aaKnown RBP9.39□□□□□ -0.91
SDCBP-211ENST00000523441 ZNRF1Q8ND25 227 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 SDR9C7Q8NEX9 313 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 OR5D13Q8NGL4 314 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 RCC1LQ96I51 464 aaKnown RBP9.39□□□□□ -0.91
SDCBP-211ENST00000523441 C7orf26Q96N11 449 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 PAPOLGQ9BWT3 736 aaKnown RBP9.39□□□□□ -0.91
SDCBP-211ENST00000523441 CYB5R1Q9UHQ9 305 aa9.39□□□□□ -0.91
SDCBP-211ENST00000523441 UNC119BA6NIH7 251 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 SYNGR1O43759 233 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 ANXA2P07355 339 aaKnown RBP9.38□□□□□ -0.91
SDCBP-211ENST00000523441 FXYD6P3P58550 94 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 SELENOWP63302 87 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 COL10A1Q03692 680 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 SSX2Q16385 188 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 TIGD6Q17RP2 521 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 WDR93Q6P2C0 686 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 SMARCD3Q6STE5 483 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 LIAT1Q6ZQX7 453 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 DTX3Q8N9I9 347 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 PAPD5Q8NDF8 572 aaKnown RBP9.38□□□□□ -0.91
SDCBP-211ENST00000523441 OR4M1Q8NGD0 313 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 OR51L1Q8NGJ5 315 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 TFAP2CQ92754 450 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 MED30Q96HR3 178 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 ZNF649Q9BS31 505 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 PARD6BQ9BYG5 372 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 BRD7Q9NPI1 651 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 INPP5EQ9NRR6 644 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 C19orf12Q9NSK7 152 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 MRPL22Q9NWU5 206 aaKnown RBP9.38□□□□□ -0.91
SDCBP-211ENST00000523441 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 TMEM5Q9Y2B1 443 aa9.38□□□□□ -0.91
SDCBP-211ENST00000523441 PTP4A3O75365 173 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 GLCEO94923 617 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 CLIC3O95833 236 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 SPARCP09486 303 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 PSKH1P11801 424 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 HIST1H1CP16403 213 aaKnown RBP9.37□□□□□ -0.91
SDCBP-211ENST00000523441 CCL3L1P16619 93 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 NOS3P29474 1203 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 SF3A3Q12874 501 aaKnown RBP eCLIP9.37□□□□□ -0.91
SDCBP-211ENST00000523441 SLC35F1Q5T1Q4 408 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 AGBL2Q5U5Z8 902 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 ERICH5Q6P6B1 374 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 DPY19L2P2Q6ZN68 376 aa9.37□□□□□ -0.91
SDCBP-211ENST00000523441 ZNF788Q6ZQV5 615 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms