RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 RAB3IPQ96QF0 476 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-216ENST00000519489 ADAT1Q9BUB4 502 aaKnown RBP5.07□□□□□ -1.6
CTNNA1-216ENST00000519489 SPATA9Q9BWV2 254 aa5.07□□□□□ -1.6
CTNNA1-216ENST00000519489 TXNIPQ9H3M7 391 aa5.07□□□□□ -1.6
CTNNA1-216ENST00000519489 HAO2Q9NYQ3 351 aa5.07□□□□□ -1.6
CTNNA1-216ENST00000519489 ACTR3BQ9P1U1 418 aa5.07□□□□□ -1.6
CTNNA1-216ENST00000519489 AGRNO00468 2067 aa5.07□□□□□ -1.6
CTNNA1-216ENST00000519489 C17orf98A8MV24 154 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 SLC28A1O00337 649 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 LSM1O15116 133 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 RNF13O43567 381 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 TPST2O60704 377 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 CNIH1O95406 144 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 ELANEP08246 267 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM153BP0C7A2 387 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 ACADSP16219 412 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 PSMB8P28062 276 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 RPL3P39023 403 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 UGT2B15P54855 530 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 NANOS2P60321 138 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 SLC35B1P78383 322 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 DYNC1I2Q13409 638 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 PPP1R7Q15435 360 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 LGALS9BQ3B8N2 356 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 LIN52Q52LA3 116 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 OR4F3Q6IEY1 312 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 C8orf74Q6P047 294 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 IL34Q6ZMJ4 242 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 CFAP77Q6ZQR2 320 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 C3orf62Q6ZUJ4 267 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 KCTD8Q6ZWB6 473 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 NAA40Q86UY6 237 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 OR4M1Q8NGD0 313 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 OR4P4Q8NGL7 312 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 CDKL2Q92772 493 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 SLCO4A1Q96BD0 722 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 ZBTB9Q96C00 473 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 C12orf43Q96C57 262 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 METTL2AQ96IZ6 378 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 MRPL57Q9BQC6 102 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 MRPL46Q9H2W6 279 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 C12orf10Q9HB07 376 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 RRAGDQ9NQL2 400 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 ZNF222Q9UK12 451 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 PRDM4Q9UKN5 801 aa5.06□□□□□ -1.6
CTNNA1-216ENST00000519489 SGCEO43556 437 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 SEC31AO94979 1220 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 AGR2O95994 175 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 IGHG4P01861 327 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 OR8U9P0C7N5 309 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 ATF4P18848 351 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 HPCAL1P37235 193 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 KIR3DL2P43630 455 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 UAP1Q16222 522 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 SNAPC1Q16533 368 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 CEP85LQ5SZL2 805 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 SLC2A7Q6PXP3 512 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 C5orf46Q6UWT4 87 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 CCDC91Q7Z6B0 441 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 SLC35E3Q7Z769 313 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 ANKRD46Q86W74 232 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 TMEM139Q8IV31 216 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 C10orf53Q8N6V4 93 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 LSMEM1Q8N8F7 131 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 ZNF491Q8N8L2 437 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 CAPSLQ8WWF8 208 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 COG8Q96MW5 612 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 DUSP26Q9BV47 211 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 PAIP1Q9H074 479 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 EVA1AQ9H8M9 152 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 SMURF2Q9HAU4 748 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 RNPEPL1Q9HAU8 725 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 POLE4Q9NR33 117 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 ING3Q9NXR8 418 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 MOB4Q9Y3A3 225 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 HSPE1-MOB4S4R3N1 261 aa5.05□□□□□ -1.6
CTNNA1-216ENST00000519489 IGHV4OR15-8A0A075B7B6 117 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 A0A087WW49 117 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 CD300LBA8K4G0 201 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 LYPD3O95274 346 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 CH25HO95992 272 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 CD7P09564 240 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 LINC00032P0C843 101 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 VAMP1P23763 118 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 PRKAA2P54646 552 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 PCBD1P61457 104 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 HPCAP84074 193 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 GNA13Q14344 377 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 ZNF74Q16587 644 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 DPY19L1Q2PZI1 675 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 KRTAP27-1Q3LI81 207 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 GALNTL6Q49A17 601 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 TMEM177Q53S58 311 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 ALG10BQ5I7T1 473 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 UTF1Q5T230 341 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 MINOS1Q5TGZ0 78 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 TCF23Q7RTU1 214 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 PEX5LQ8IYB4 626 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 TMEM185AQ8NFB2 350 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 OR4A15Q8NGL6 344 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms