RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ZNF705AQ6ZN79 300 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-208ENST00000519004 Q6ZNB5 142 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 SLC16A14Q7RTX9 510 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 DPY19L4Q7Z388 723 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 ZNF547Q8IVP9 402 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 FAM185AQ8N0U4 392 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 OR2I1PQ8NGU4 316 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 ASB5Q8WWX0 329 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 HHIPL1Q96JK4 782 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 NCOR1P1Q9H4R4 102 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 WDR76Q9H967 626 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 LANCL2Q9NS86 450 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-208ENST00000519004 LSM5Q9Y4Y9 91 aaKnown RBP12.04□□□□□ -0.48
PABPC1-208ENST00000519004 LIPGQ9Y5X9 500 aa12.04□□□□□ -0.48
PABPC1-208ENST00000519004 IGKV1-8A0A0C4DH67 115 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 A0A1W2PPQ1 181 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 XKRY2A2RUG3 117 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 ZNF860A6NHJ4 632 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 A8MXE2 369 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 XKRYO14609 159 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 NSA2O95478 260 aaKnown RBP12.03□□□□□ -0.48
PABPC1-208ENST00000519004 PCCBP05166 539 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 FSTP19883 344 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 FLT3LGP49771 235 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 MAP2K5Q13163 448 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 SNIP1Q8TAD8 396 aaKnown RBP12.03□□□□□ -0.48
PABPC1-208ENST00000519004 LRFN1Q9P244 771 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 CKLFQ9UBR5 152 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 TUBD1Q9UJT1 453 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 HS3ST2Q9Y278 367 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 DOCK3Q8IZD9 2030 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 TCRBV21S2A2A0A5A6 115 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 ACAA2P42765 397 aaKnown RBP12.03□□□□□ -0.48
PABPC1-208ENST00000519004 PDLIM4P50479 330 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 POLR2HP52434 150 aaKnown RBP12.03□□□□□ -0.48
PABPC1-208ENST00000519004 SLC37A1P57057 533 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 SPOCK1Q08629 439 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 OR5I1Q13606 314 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 P2RY6Q15077 328 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 C1orf100Q5SVJ3 147 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 LYPD6Q86Y78 171 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 ARL14EPQ8N8R7 260 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-208ENST00000519004 OR52N4Q8NGI2 321 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 SMARCD2Q92925 531 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 FAM46BQ96A09 425 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 COL26A1Q96A83 441 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 HIST1H2AAQ96QV6 131 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
PABPC1-208ENST00000519004 GPR173Q9NS66 373 aa12.03□□□□□ -0.48
PABPC1-208ENST00000519004 HSPB2A8KAH6 182 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 B4DEV8 164 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 CLDN34H7C241 214 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 ETV2O00321 342 aaPredicted RBP12.02□□□□□ -0.48
PABPC1-208ENST00000519004 DIRAS3O95661 229 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 PNPP00491 289 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 BCL6P41182 706 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 ELLP55199 621 aaPredicted RBP12.02□□□□□ -0.48
PABPC1-208ENST00000519004 HLA-DRB3P79483 266 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 UNC119Q13432 240 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 HSPB2Q16082 182 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 VAX1Q5SQQ9 334 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 PLXDC2Q6UX71 529 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 Q7L0L9 218 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 DOK4Q8TEW6 326 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 HLA-CQ95604 372 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 TMEM242Q9NWH2 141 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 HSF4Q9ULV5 492 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 WSB1Q9Y6I7 421 aa12.02□□□□□ -0.48
PABPC1-208ENST00000519004 TIMP1P01033 207 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 MBPP02686 304 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-208ENST00000519004 RPS4XP62701 263 aaKnown RBP12.02□□□□□ -0.49
PABPC1-208ENST00000519004 PMS2P11Q13670 270 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 ZAR1Q86SH2 424 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 SLC25A44Q96H78 314 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-208ENST00000519004 GPX7Q96SL4 187 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-208ENST00000519004 LPAR4Q99677 370 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 ABHD14AQ9BUJ0 271 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 ELOVL3Q9HB03 270 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 MKKSQ9NPJ1 570 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-208ENST00000519004 KIAA1456Q9P272 454 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 ZFP30Q9Y2G7 519 aa12.02□□□□□ -0.49
PABPC1-208ENST00000519004 A6NIZ1 184 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 NXPH2O95156 264 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
PABPC1-208ENST00000519004 GLRA1P23415 457 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 EMDP50402 254 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 RAP1BP61224 184 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 TMEM176BQ3YBM2 270 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-208ENST00000519004 SP5Q6BEB4 398 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-208ENST00000519004 PTCRAQ6ISU1 281 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-208ENST00000519004 LCN10Q6JVE6 187 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 VN1R2Q8NFZ6 395 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 DNAJA3Q96EY1 480 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 SRD5A3Q9H8P0 318 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 ANAPC10Q9UM13 185 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 YLPM1P49750 1951 aaKnown RBP12.01□□□□□ -0.49
PABPC1-208ENST00000519004 FIGNL2A6NMB9 653 aa12.01□□□□□ -0.49
PABPC1-208ENST00000519004 ARHGAP19Q14CB8 494 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms