RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ATRQ13535 2644 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF670-ZNF695F2Z2N8 137 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 H3BSH0 61 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 IFNL4K9M1U5 179 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 DLGAP1O14490 977 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-219ENST00000518824 RGS9O75916 674 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-219ENST00000518824 RPP14O95059 124 aaKnown RBP11.11□□□□□ -0.63
VEGFA-219ENST00000518824 BAG2O95816 211 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 TFF1P04155 84 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 ANPEPP15144 967 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 PAX2Q02962 417 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF85Q03923 595 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF154Q13106 437 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF684Q5T5D7 378 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 DCAF12L2Q5VW00 463 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 FGFRL1Q8N441 504 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 OR1M1Q8NGA1 313 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 OR11L1Q8NGX0 322 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 OR8S1Q8NH09 359 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 ASB17Q8WXJ9 295 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 PIGCQ92535 297 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-219ENST00000518824 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 TMEM14AQ9Y6G1 99 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 DOCK11Q5JSL3 2073 aa11.11□□□□□ -0.63
VEGFA-219ENST00000518824 A0A0G2JMP0 313 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 A0A0X1KG70 313 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 A0A1B0GW55 424 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 hCG_1807616A0A1W2PRN6 198 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 A6NIN4 97 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 LRRC30A6NM36 301 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 A8MXK9 166 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF254O75437 659 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 FOXH1O75593 365 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 LHBP01229 141 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 GYPAP02724 150 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4L2P0CJ85 424 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4L3P0CJ86 424 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4L4P0CJ87 422 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4L5P0CJ88 424 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4L6P0CJ89 424 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4L7P0CJ90 424 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 IRF2P14316 349 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 RPS2P15880 293 aaKnown RBP11.1□□□□□ -0.63
VEGFA-219ENST00000518824 GABRB1P18505 474 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 CFL1P23528 166 aaKnown RBP11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DCTDP32321 178 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 CDC42P60953 191 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 KRTAP24-1Q3LI83 254 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 CEP78Q5JTW2 689 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4L9Q6RFH8 374 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-219ENST00000518824 WDR82Q6UXN9 313 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 ZBTB49Q6ZSB9 765 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 FAM90A1Q86YD7 464 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 MUC20Q8N307 709 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-219ENST00000518824 SPERTQ8NA61 448 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 CSNK2A3Q8NEV1 391 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 OR10H4Q8NGA5 316 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 OR4M2Q8NGB6 313 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 OR5P3Q8WZ94 311 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 RPL3LQ92901 407 aaKnown RBP11.1□□□□□ -0.63
VEGFA-219ENST00000518824 ERGIC1Q969X5 290 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 C9orf16Q9BUW7 83 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 RASSF4Q9H2L5 321 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 RGCCQ9H4X1 137 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 C7orf69Q9H7B7 122 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 DUX4Q9UBX2 424 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 NUFIP1Q9UHK0 495 aaKnown RBP11.1□□□□□ -0.63
VEGFA-219ENST00000518824 OR52A1Q9UKL2 312 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 GTF2A1LQ9UNN4 478 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 R4GMQ9 66 aa11.1□□□□□ -0.63
VEGFA-219ENST00000518824 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-219ENST00000518824 A0A0U1RQV5 110 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 LOC110117498-PIK3R3F6TDL0 507 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 J3QRE1 110 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 LGALS8O00214 317 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 P2RY10O00398 339 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 CDIPTO14735 213 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 CST4P01036 141 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 IFNA2P01563 188 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 FAHP16930 419 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF12P17014 697 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 AMY2BP19961 511 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 PSMB10P40306 273 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 GMFBP60983 142 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 SNRPGP62308 76 aaKnown RBP11.09□□□□□ -0.63
VEGFA-219ENST00000518824 EGR3Q06889 387 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 ODF4Q2M2E3 257 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-219ENST00000518824 TP53I3Q53FA7 332 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 ESCO2Q56NI9 601 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 LIPNQ5VXI9 398 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 PHC2Q8IXK0 858 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 ENTHD1Q8IYW4 607 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 ELMOD2Q8IZ81 293 aa11.09□□□□□ -0.63
VEGFA-219ENST00000518824 C1orf87Q8N0U7 546 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms