RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 EDEM2Q9BV94 578 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CCDC106Q9BWC9 280 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TAPBPLQ9BX59 468 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TEX12Q9BXU0 123 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CHST6Q9GZX3 395 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 GABARAPL1Q9H0R8 117 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SIRPDQ9H106 197 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 VCX3BQ9H321 246 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 C8orf33Q9H7E9 229 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 UCK1Q9HA47 277 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SYTL2Q9HCH5 934 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ACP6Q9NPH0 428 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 GIN1Q9NXP7 522 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 UTP6Q9NYH9 597 aaKnown RBP-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 MRPL39Q9NYK5 338 aaKnown RBP-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SPASTQ9UBP0 616 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TRMT112Q9UI30 125 aaKnown RBP-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 VANGL2Q9ULK5 521 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 PPIEQ9UNP9 301 aaKnown RBP-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 STARD10Q9Y365 291 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SMARCA4P51532 1647 aa-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 KIAA0100Q14667 2235 aaKnown RBP-1.56□□□□□ -2.66
RNU6-1238P-201ENST00000517215 MSH6P52701 1360 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SYNRGQ9UMZ2 1314 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 DYNC1H1Q14204 4646 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 IGHV3-43A0A0B4J1X8 118 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 LOC100653049A0A140TA62 436 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 A0A1W2PRD5 423 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 A0A1W2PRF3 423 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 A0A1W2PRM7 423 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 MEIS3P1A6NDR6 274 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 A6NED7 52 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 NUPR2A6NF83 97 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 C2orf74A8MZ97 194 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 H0YC42 278 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 LANCL1O43813 399 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CXCL13O43927 109 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SH2D1AO60880 128 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 KRT34O76011 436 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SCGB1D1O95968 90 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 GAS8O95995 478 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SFTPBP07988 381 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CECR9P0C854 216 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 PABPC4LP0CB38 370 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CALM1P0DP23 149 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CALM2P0DP24 149 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CALM3P0DP25 149 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 COX5AP20674 150 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CNTFP26441 200 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 FOXN2P32314 431 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 MC5RP33032 325 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CEACAM3P40198 252 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ACAA2P42765 397 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 PTGFRP43088 359 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 RPL27AP46776 148 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 NUDT2P50583 147 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 RAB28P51157 221 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CAPZA1P52907 286 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TMEM258P61165 79 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ARHGAP1Q07960 439 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 HTR4Q13639 388 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 WFDC2Q14508 124 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 LASP1Q14847 261 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TAF12Q16514 161 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TSTQ16762 297 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TRIM16LQ309B1 348 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 BMP2KLQ5H9B9 411 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 PABPC1L2AQ5JQF8 200 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 NKAIN2Q5VXU1 208 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 OR52E8Q6IFG1 317 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 GIMAP6Q6P9H5 292 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ENPP6Q6UWR7 440 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 PATE2Q6UY27 113 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TMEM182Q6ZP80 229 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 FAM43BQ6ZT52 329 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 GOLGA7Q7Z5G4 137 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 MDP1Q86V88 176 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 HEATR4Q86WZ0 1026 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ARFGAP2Q8N6H7 521 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ARL10Q8N8L6 244 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 OR2T34Q8NGX1 318 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 OR2T3Q8NH03 318 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 OR10AC1Q8NH08 325 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 OR8S1Q8NH09 359 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 WDR36Q8NI36 951 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ANGPTL6Q8NI99 470 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 CNIH3Q8TBE1 160 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ZCRB1Q8TBF4 217 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 BAALCQ8WXS3 180 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 OR5P2Q8WZ92 322 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 GHSRQ92847 366 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 DNASE1L2Q92874 299 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 DEFB118Q96PH6 123 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 PANX3Q96QZ0 392 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SERPINI1Q99574 410 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 NAP1L4Q99733 375 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 ITPAQ9BY32 194 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 TLNRD1Q9H1K6 362 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 SND1-IT1Q9HBX3 110 aa-1.57□□□□□ -2.66
RNU6-1238P-201ENST00000517215 PDE7BQ9NP56 450 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms