RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MELTFP08582 738 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 AKAIN1P0CW23 69 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 NAT2P11245 290 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 EDN3P14138 238 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 MPGP29372 298 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 OR3A2P47893 321 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 LINC00303Q3SY05 128 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 FBXW9Q5XUX1 488 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 FAAP20Q6NZ36 180 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 ZADH2Q8N4Q0 377 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 SPSB4Q96A44 273 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 SPSB1Q96BD6 273 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 RNF170Q96K19 258 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 C12orf49Q9H741 205 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 MCUBQ9NWR8 336 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 ZNF107Q9UII5 783 aaPredicted RBP12.99□□□□□ -0.33
VCAN-211ENST00000513984 GTF3C1Q12789 2109 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 LOC100509620A0A075B734 347 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 MEIS3P1A6NDR6 274 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 TMEM235A6NFC5 223 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 PEX14O75381 377 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 HLA-HP01893 362 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 CHRM2P08172 466 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 GTF2F2P13984 249 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 ARR3P36575 388 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 PTGFRP43088 359 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 OR8B8Q15620 311 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 TMEM42Q69YG0 159 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 Q6ZTK2 550 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 DPPA2Q7Z7J5 298 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 TMEM229BQ8NBD8 167 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 TMEM104Q8NE00 496 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 OR10R2Q8NGX6 335 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 NPRL2Q8WTW4 380 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 TMEM59Q9BXS4 323 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 NOX3Q9HBY0 568 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 RANGRFQ9HD47 186 aaPredicted RBP12.99□□□□□ -0.33
VCAN-211ENST00000513984 NDUFB6O95139 128 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 MPIG6BO95866 241 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 IL18BPO95998 194 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 VEGFCP49767 419 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 TAS2R19P59542 299 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 FAM3AP98173 230 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 ZNF92Q03936 586 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 ZNF169Q14929 603 aaPredicted RBP12.98□□□□□ -0.33
VCAN-211ENST00000513984 P4HA3Q7Z4N8 544 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 TCTE3Q8IZS6 198 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 OR1K1Q8NGR3 316 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 GIMAP1Q8WWP7 306 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 CMBLQ96DG6 245 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 ZMAT3Q9HA38 289 aaKnown RBP12.98□□□□□ -0.33
VCAN-211ENST00000513984 GPR173Q9NS66 373 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 KLK13Q9UKR3 277 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 ELF5Q9UKW6 265 aaPredicted RBP12.98□□□□□ -0.33
VCAN-211ENST00000513984 PTPRZ1P23471 2315 aaPredicted RBP12.98□□□□□ -0.33
VCAN-211ENST00000513984 ASPMQ8IZT6 3477 aa12.98□□□□□ -0.33
VCAN-211ENST00000513984 A0A0A6YYD4 124 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 KLK10O43240 276 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 PRAF2O60831 178 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 CD3DP04234 171 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 MECP2P51608 486 aaKnown RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 CD83Q01151 205 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 CNN3Q15417 329 aaKnown RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 GUSBP1Q15486 140 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 ZFP69Q49AA0 526 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 DMRTC1Q5HYR2 192 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 CLVS2Q5SYC1 327 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 STEAP1BQ6NZ63 245 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 TMEM53Q6P2H8 277 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 GABRG1Q8N1C3 465 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 PIGTQ969N2 578 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 SARAFQ96BY9 339 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 FYTTD1Q96QD9 318 aaKnown RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 NICN1Q9BSH3 213 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 BEX2Q9BXY8 128 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 CST11Q9H112 138 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 NEK6Q9HC98 313 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 NKIRAS2Q9NYR9 191 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 ICMTO60725 284 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 WISP2O76076 250 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 CD79AP11912 226 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 SDHBP21912 280 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 PRKACBP22694 351 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 STOMP27105 288 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 NKX2-5P52952 324 aaPredicted RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 ZP1P60852 638 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 RAB1AP62820 205 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 RBMS2Q15434 407 aaKnown RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 CDNFQ49AH0 187 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 ZBTB37Q5TC79 503 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 C1QL2Q7Z5L3 287 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 OR4D10Q8NGI6 311 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 OR5D18Q8NGL1 313 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 TNFAIP8L1Q8WVP5 186 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 BCL2L2Q92843 193 aaPredicted RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 CPNE2Q96FN4 548 aaPredicted RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 URM1Q9BTM9 101 aaKnown RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 OR51J1Q9H342 316 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms