RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ZNF727A8MUV8 499 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 UBE2CO00762 179 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 ABHD16AO95870 558 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 QDPRP09417 244 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 OR8U8P0C7N1 319 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 OMGP23515 440 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 IL12BP29460 328 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 OR1D4P47884 311 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 ZNF84P51523 738 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 FXYD4P59646 89 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TMEM128Q5BJH2 165 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TMEM182Q6ZP80 229 aaPredicted RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 ATG4DQ86TL0 474 aaPredicted RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 RNF126Q9BV68 326 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 NMNAT2Q9BZQ4 307 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 HIF3AQ9Y2N7 669 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TMEM184BQ9Y519 407 aaPredicted RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 CLDN16Q9Y5I7 305 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 HEATR5AQ86XA9 2040 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 IGKV1D-42A0A075B6H8 117 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 BORCS7-ASMTA0A0B4J1R7 106 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 MFNGO00587 321 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 ZNF217O75362 1048 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 ZNF205O95201 554 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 IL33O95760 270 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TUBG1P23258 451 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 RPS4XP62701 263 aaKnown RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 DEFB133Q30KQ1 61 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 AKR1C8PQ5T2L2 129 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 GLIPR1L1Q6UWM5 242 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 ZDHHC22Q8N966 263 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 MCHR2Q969V1 340 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 LURAP1Q96LR2 239 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 GPX7Q96SL4 187 aaPredicted RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 CRLF2Q9HC73 371 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.58□□□□□ -1.04
VCAN-210ENST00000513960 FAM212BQ9NTI7 297 aaPredicted RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 ZNF705GA8MUZ8 300 aaPredicted RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 OPN1LWP04000 364 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 CD37P11049 281 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 FABP4P15090 132 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 CHATP28329 748 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 GALNSP34059 522 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TAGLN2P37802 199 aaKnown RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 DHPSP49366 369 aaPredicted RBP8.58□□□□□ -1.04
VCAN-210ENST00000513960 UBE2KP61086 200 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 HAGHQ16775 308 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 Q3ZCU0 254 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 SLC25A24Q6NUK1 477 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TERB2Q8NHR7 220 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TAAR8Q969N4 342 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 TBL1XR1Q9BZK7 514 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 OR11A1Q9GZK7 315 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 NELFAQ9H3P2 528 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 GPR27Q9NS67 375 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 CUTCQ9NTM9 273 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 LUZP4Q9P127 313 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 DNAH14Q0VDD8 3507 aa8.58□□□□□ -1.04
VCAN-210ENST00000513960 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 FBP1P09467 338 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 CTLA4P16410 223 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 HSD11B1P28845 292 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 SLC25A1P53007 311 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 FMODQ06828 376 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 MST1LQ2TV78 715 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 ZNF321PQ8N8H1 164 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 INTS12Q96CB8 462 aaKnown RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 POM121Q96HA1 1249 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 C2orf50Q96LR7 162 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 PBDC1Q9BVG4 233 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 UNKLQ9H9P5 680 aaKnown RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 CYTL1Q9NRR1 136 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 METTL1Q9UBP6 276 aaKnown RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 RCL1Q9Y2P8 373 aaKnown RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 LOC101059948A0A1B0GTJ6 334 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 TSTD3H0UI37 97 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 PHOX2AO14813 284 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 G0S2P27469 103 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 ZNF93P35789 620 aaPredicted RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 SLC37A1P57057 533 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 TMEM33P57088 247 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 GLO1Q04760 184 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 ABCA11PQ4W5N1 156 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 RPUSD3Q6P087 351 aaKnown RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 SYT13Q7L8C5 426 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 OR51T1Q8NGJ9 327 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 ADAMTS17Q8TE56 1095 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 PTPMT1Q8WUK0 201 aaPredicted RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 SCGB3A2Q96PL1 93 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 NUDT22Q9BRQ3 303 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 VSX1Q9NZR4 365 aaPredicted RBP8.57□□□□□ -1.04
VCAN-210ENST00000513960 MMACHCQ9Y4U1 282 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 MPDZO75970 2070 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 A0A1W2PP11 408 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 NPIPA5E9PKD4 350 aa8.57□□□□□ -1.04
VCAN-210ENST00000513960 GPR37O15354 613 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms