RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ZNF154Q13106 437 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 STX5Q13190 355 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 STX3Q13277 289 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 CHI3L2Q15782 390 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ZNF791Q3KP31 576 aaPredicted RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 SLC36A3Q495N2 470 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 NOXRED1Q6NXP6 359 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 CBLN3Q6UW01 205 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 TMEM107Q6UX40 140 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 CCBE1Q6UXH8 406 aaPredicted RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 GALNT10Q86SR1 603 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 NRMQ8IXM6 262 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ZNF100Q8IYN0 542 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 UBQLNLQ8IYU4 475 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 CNPY4Q8N129 248 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 SLC34A3Q8N130 599 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ATP6V1C2Q8NEY4 427 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 OR4K17Q8NGC6 315 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 OR5M1Q8NGP8 315 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 OR9A2Q8NGT5 310 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 OR8K3Q8NH51 312 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 NUBPLQ8TB37 319 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 TCP10LQ8TDR4 215 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ITLN2Q8WWU7 325 aaPredicted RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.16□□□□□ -1.9
HTT-210ENST00000512909 TMBIM1Q969X1 311 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 MARC2Q969Z3 335 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 EFHD2Q96C19 240 aaPredicted RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 PPCDCQ96CD2 204 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 TUBGCP3Q96CW5 907 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 L3HYPDHQ96EM0 354 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 RILPQ96NA2 401 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 COL21A1Q96P44 957 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 PAXXQ9BUH6 204 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 C1orf50Q9BV19 199 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 DSN1Q9H410 356 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 DDX18Q9NVP1 670 aaKnown RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 C1orf109Q9NX04 203 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ZNF225Q9UK10 706 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 DKKL1Q9UK85 242 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 SAMD4AQ9UPU9 718 aaKnown RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 PLLPQ9Y342 182 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 PKD1L2Q7Z442 2459 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 IGLV8-61A0A075B6I0 122 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 TMEM114B3SHH9 223 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 H3BQF6 201 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 SDHDO14521 159 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 LYPLA1O75608 230 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 CBR3O75828 277 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 SCELO95171 688 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 IGHG3P01860 377 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 IGKV3-11P04433 115 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ALOX5P09917 674 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 GABRA1P14867 456 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 PSMB1P20618 241 aaKnown RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 BGNP21810 368 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 HPCAL1P37235 193 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 RPL29P47914 159 aaKnown RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 MEOX2P50222 304 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 PSMD4P55036 377 aaKnown RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 NAA20P61599 178 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ZNF763Q0D2J5 394 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ART3Q13508 389 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 RCAN2Q14206 197 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 EBPQ15125 230 aaKnown RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 ZNF630Q2M218 657 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 GGTA1PQ4G0N0 100 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ATP6AP1LQ52LC2 224 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 C1orf185Q5T7R7 199 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 CPTPQ5TA50 214 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ZNF57Q68EA5 555 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 TIGD3Q6B0B8 471 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 FAM71E1Q6IPT2 247 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ACSM5Q6NUN0 579 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ENPP6Q6UWR7 440 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 C16orf62Q7Z3J2 963 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 MARCH3Q86UD3 253 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ZNF584Q8IVC4 421 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 RIBC1Q8N443 379 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 RPRMLQ8N4K4 120 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 LINC00612Q8N6U2 182 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ZNF615Q8N8J6 731 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 EIF1ADQ8N9N8 165 aaKnown RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 GATSQ8NAP1 163 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 FNDC5Q8NAU1 212 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ZFP62Q8NB50 900 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 FBXO30Q8TB52 745 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 MRAPQ8TCY5 172 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 PAQR8Q8TEZ7 354 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 TWIST2Q8WVJ9 160 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 CIDECQ96AQ7 238 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 FGGYQ96C11 551 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 DTNBP1Q96EV8 351 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 PKNOX2Q96KN3 472 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 PPP3R2Q96LZ3 170 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 OSBPL11Q9BXB4 747 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 ZNF717Q9BY31 904 aaPredicted RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 ANGPTL4Q9BY76 406 aa3.15□□□□□ -1.91
HTT-210ENST00000512909 MRPL13Q9BYD1 178 aaKnown RBP3.15□□□□□ -1.91
HTT-210ENST00000512909 TBL1XR1Q9BZK7 514 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms