RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KLF17Q5JT82 389 aaPredicted RBP11.08□□□□□ -0.64
RNF4-215ENST00000511843 LIPNQ5VXI9 398 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 NXNL2Q5VZ03 156 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 DCDC5Q6ZRR9 648 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 SSX6Q7RTT6 188 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 SLC35F2Q8IXU6 374 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 GCSAMQ8N6F7 178 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 SEMA6DQ8NFY4 1073 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 OR1M1Q8NGA1 313 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 OR8B3Q8NGG8 313 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 NANPQ8TBE9 248 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 LRRC29Q8WV35 223 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 SEH1LQ96EE3 360 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 OR8B2Q96RD0 313 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 TBX5Q99593 518 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 APOL4Q9BPW4 351 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 OSBPL10Q9BXB5 764 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 RASSF4Q9H2L5 321 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 ADGRL4Q9HBW9 690 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 FAM206AQ9NX38 181 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 H2AFY2Q9P0M6 372 aaPredicted RBP11.08□□□□□ -0.64
RNF4-215ENST00000511843 GTF2A1LQ9UNN4 478 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 AUP1Q9Y679 476 aa11.08□□□□□ -0.64
RNF4-215ENST00000511843 IGHV2-70DA0A0C4DH43 119 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 FCN3O75636 299 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 CFL1P23528 166 aaKnown RBP11.07□□□□□ -0.64
RNF4-215ENST00000511843 GMFBP60983 142 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 WDR25Q64LD2 544 aaPredicted RBP11.07□□□□□ -0.64
RNF4-215ENST00000511843 KCTD18Q6PI47 426 aaPredicted RBP11.07□□□□□ -0.64
RNF4-215ENST00000511843 ZNF841Q6ZN19 808 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 NLRC3Q7RTR2 1065 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 COMMD2Q86X83 199 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
RNF4-215ENST00000511843 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.07□□□□□ -0.64
RNF4-215ENST00000511843 SPERTQ8NA61 448 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 CSNK2A3Q8NEV1 391 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 OR51G2Q8NGK0 314 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 PIGCQ92535 297 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 UBE2FQ969M7 185 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 ITPKCQ96DU7 683 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 FAM71F1Q96KD3 344 aaPredicted RBP11.07□□□□□ -0.64
RNF4-215ENST00000511843 TECTBQ96PL2 329 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 MRI1Q9BV20 369 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 GABARAPL3Q9BY60 117 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 MROQ9BYG7 248 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 RGCCQ9H4X1 137 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 NIPAL2Q9H841 368 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 SMURF1Q9HCE7 757 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 CLN8Q9UBY8 286 aa11.07□□□□□ -0.64
RNF4-215ENST00000511843 SOX21Q9Y651 276 aaPredicted RBP11.07□□□□□ -0.64
RNF4-215ENST00000511843 A0A1B0GW55 424 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 OOEPA6NGQ2 149 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 SLC22A31A6NKX4 558 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 C22orf46C9J442 243 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 EI24O14681 340 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 CDIPTO14735 213 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 ADAM20O43506 726 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 TFF1P04155 84 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4L2P0CJ85 424 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4L3P0CJ86 424 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4L4P0CJ87 422 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4L5P0CJ88 424 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4L6P0CJ89 424 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4L7P0CJ90 424 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 PSMB10P40306 273 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 RIDAP52758 137 aaKnown RBP11.06□□□□□ -0.64
RNF4-215ENST00000511843 ROM1Q03395 351 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 ZIK1Q3SY52 487 aaPredicted RBP11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4L9Q6RFH8 374 aaPredicted RBP11.06□□□□□ -0.64
RNF4-215ENST00000511843 ZNF322Q6U7Q0 402 aaPredicted RBP11.06□□□□□ -0.64
RNF4-215ENST00000511843 WDR82Q6UXN9 313 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 ZNF679Q8IYX0 411 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 BPIFB2Q8N4F0 458 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 PLPP7Q8NBV4 271 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 FAM81AQ8TBF8 368 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 OR51E1Q8TCB6 317 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 ZNF418Q8TF45 676 aaPredicted RBP11.06□□□□□ -0.64
RNF4-215ENST00000511843 HPSE2Q8WWQ2 592 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 RPL3LQ92901 407 aaKnown RBP11.06□□□□□ -0.64
RNF4-215ENST00000511843 DACT3Q96B18 629 aaPredicted RBP11.06□□□□□ -0.64
RNF4-215ENST00000511843 PBOV1Q9GZY1 135 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 DUX4Q9UBX2 424 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 ZNF69Q9UC07 566 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 TMEM14AQ9Y6G1 99 aa11.06□□□□□ -0.64
RNF4-215ENST00000511843 ANXA2P2A6NMY6 339 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 ZNF670-ZNF695F2Z2N8 137 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 H3BSH0 61 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.05□□□□□ -0.64
RNF4-215ENST00000511843 TNFRSF13BO14836 293 aaPredicted RBP11.05□□□□□ -0.64
RNF4-215ENST00000511843 SRSF10O75494 262 aaKnown RBP11.05□□□□□ -0.64
RNF4-215ENST00000511843 FSTL3O95633 263 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 LHBP01229 141 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 TTRP02766 147 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 IGHV4-38-2P0DP08 117 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 FAHP16930 419 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 PAX8Q06710 450 aa11.05□□□□□ -0.64
RNF4-215ENST00000511843 MZT1Q08AG7 82 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms