RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TRGV5A0A0B4J1U4 118 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 A0A1W2PR80 420 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 SPRY1O43609 319 aaPredicted RBP12.98□□□□□ -0.33
PHF3-209ENST00000509330 TSC22D2O75157 780 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 FARS2O95363 451 aaKnown RBP12.98□□□□□ -0.33
PHF3-209ENST00000509330 RAB3DO95716 219 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 AMY2AP04746 511 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 LPLP06858 475 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
PHF3-209ENST00000509330 CCL1P22362 96 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 OTX1P32242 354 aaPredicted RBP12.98□□□□□ -0.33
PHF3-209ENST00000509330 ZNF529Q6P280 563 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 ZFP62Q8NB50 900 aaPredicted RBP12.98□□□□□ -0.33
PHF3-209ENST00000509330 C15orf40Q8WUR7 153 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 MAFIPQ8WZ33 124 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 TMEM246Q9BRR3 403 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 TIMM10BQ9Y5J6 103 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 PIEZO2Q9H5I5 2752 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 BPNT1O95861 308 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 CYB5AP00167 134 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 TNFSF10P50591 281 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 RRADP55042 308 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 QRFPP83859 136 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 SLC7A5P1Q8MH63 180 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 FAM109AQ8N4B1 249 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 OR5M9Q8NGP3 310 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 APH1AQ96BI3 265 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 WDR89Q96FK6 387 aaPredicted RBP12.98□□□□□ -0.33
PHF3-209ENST00000509330 UQCC2Q9BRT2 126 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 TMEM59Q9BXS4 323 aa12.98□□□□□ -0.33
PHF3-209ENST00000509330 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 CDC14BO60729 498 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 YES1P07947 543 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 ZNF92Q03936 586 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 LPAR5Q9H1C0 372 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 RABL2AQ9UBK7 228 aaPredicted RBP12.97□□□□□ -0.33
PHF3-209ENST00000509330 RABL2BQ9UNT1 228 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 CTSSP25774 331 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 FAUP35544 74 aaKnown RBP12.97□□□□□ -0.33
PHF3-209ENST00000509330 ZNF260Q3ZCT1 412 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 ZNF584Q8IVC4 421 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 SEMA6DQ8NFY4 1073 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 C1orf147Q96MC9 270 aaPredicted RBP12.97□□□□□ -0.33
PHF3-209ENST00000509330 ZNF224Q9NZL3 707 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 LUZP4Q9P127 313 aa12.97□□□□□ -0.33
PHF3-209ENST00000509330 C5orf49A4QMS7 147 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 NAP1L6A6NFF2 107 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 ICMTO60725 284 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 NDUFB6O95139 128 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 VSIG10L2P0DP72 767 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 ZP1P60852 638 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 HIKESHIQ53FT3 197 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 IDO2Q6ZQW0 420 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
PHF3-209ENST00000509330 HAS2Q92819 552 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 RADILQ96JH8 1075 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 MICU1Q9BPX6 476 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 EMC3Q9P0I2 261 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 HSPB11Q9Y547 144 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 APC2O95996 2303 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 A0A0U1RQV5 110 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 TMEM14DPA8MWL7 114 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 ZNF736B4DX44 427 aaPredicted RBP12.96□□□□□ -0.33
PHF3-209ENST00000509330 SIX6O95475 246 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 ZNF24P17028 368 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 MTCP1P56278 107 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 CLN3Q13286 438 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 TNK1Q13470 666 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 CRIP3Q6Q6R5 217 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 DRAM2Q6UX65 266 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 TCTE3Q8IZS6 198 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 PNLDC1Q8NA58 520 aaKnown RBP12.96□□□□□ -0.33
PHF3-209ENST00000509330 TMEM178AQ8NBL3 297 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 OR51T1Q8NGJ9 327 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 OR10R2Q8NGX6 335 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 ARHGAP5-AS1Q96IT6 56 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 S100A13Q99584 98 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 CHST5Q9GZS9 411 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 CA10Q9NS85 328 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 ZNF581Q9P0T4 197 aa12.96□□□□□ -0.33
PHF3-209ENST00000509330 OR6C6A6NF89 314 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 LINC01387J3KSC0 135 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 TMEM225BP0DP42 221 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 CD37P11049 281 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 GABRR1P24046 479 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 PTGFRP43088 359 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 ACTBP60709 375 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 ACTG1P63261 375 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 ECH1Q13011 328 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 PDCD1Q15116 288 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 RIPPLY2Q5TAB7 128 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 DNM1P46Q6ZS02 220 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 NCCRP1Q6ZVX7 275 aaPredicted RBP12.96□□□□□ -0.34
PHF3-209ENST00000509330 BHLHE23Q8NDY6 225 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 OR52H1Q8NGJ2 320 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 V9GYS6 101 aa12.96□□□□□ -0.34
PHF3-209ENST00000509330 MTRF1O75570 445 aaKnown RBP12.95□□□□□ -0.34
PHF3-209ENST00000509330 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms