RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 NDUFA2O43678 99 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 GRPP07492 148 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 IGHV4-38-2P0DP08 117 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 EGR1P18146 543 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 ACKR3P25106 362 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 NPY4RP50391 375 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 ESRRGP62508 458 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 UBA52P62987 128 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 EFNB1P98172 346 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 APOFQ13790 326 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 PTGES3Q15185 160 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 KCNJ8Q15842 424 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 ATP6AP1Q15904 470 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 SFRP4Q6FHJ7 346 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 DEGS2Q6QHC5 323 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 BTNL3Q6UXE8 466 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 WDR82Q6UXN9 313 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 BCL6BQ8N143 479 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 SIGLECL1Q8N7X8 197 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 OR1M1Q8NGA1 313 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 OR8B12Q8NGG6 310 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 THEM6Q8WUY1 208 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 ITPKCQ96DU7 683 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 PGAM5Q96HS1 289 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 LYZL4Q96KX0 146 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 C1orf147Q96MC9 270 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF48Q96MX3 618 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 TEAD3Q99594 435 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 RSRP1Q9BUV0 290 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 MMADHCQ9H3L0 296 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 PPP1R3EQ9H7J1 279 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 RNPEPL1Q9HAU8 725 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 SMURF1Q9HCE7 757 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 BRD7Q9NPI1 651 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 TVP23BQ9NYZ1 205 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 KAAG1Q9UBP8 84 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 ZNF391Q9UJN7 358 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 RHBDD3Q9Y3P4 386 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 LRP12Q9Y561 859 aa7.54□□□□□ -1.2
PDLIM5-209ENST00000506632 ACOD1A6NK06 481 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 A6NLC8 198 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ZAR1LA6NP61 321 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ADAM20O43506 726 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ENSAO43768 121 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 PRKYO43930 277 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 MITFO75030 526 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 CST4P01036 141 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 IGLV3-1P01715 115 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 MMP9P14780 707 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 CFPP27918 469 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 EPHA2P29317 976 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 DCTDP32321 178 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 RASSF2P50749 326 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 HCCSP53701 268 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 RPS7P62081 194 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ACTG1P63261 375 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 CSNK2BP67870 215 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 IL5RAQ01344 420 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ROM1Q03395 351 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 SNCBQ16143 134 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 SNAPC1Q16533 368 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 FAM76BQ5HYJ3 339 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 SLX4IPQ5VYV7 408 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 C12orf73Q69YU5 71 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 KDM4DQ6B0I6 523 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 C12orf54Q6X4T0 127 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 GALNT4Q8N4A0 578 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 BOLLQ8N9W6 283 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 OR8S1Q8NH09 359 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 LRRC29Q8WV35 223 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 HPSE2Q8WWQ2 592 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ITFG2Q969R8 447 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 PAPOLGQ9BWT3 736 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 TEX12Q9BXU0 123 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 GABARAPL1Q9H0R8 117 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 PRDM13Q9H4Q3 707 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ABCB9Q9NP78 766 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 FAM206AQ9NX38 181 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 KIF17Q9P2E2 1029 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 ERVK-18Q9QC07 812 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 LAMP5Q9UJQ1 280 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 COPS3Q9UNS2 423 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 MPC1Q9Y5U8 109 aa7.53□□□□□ -1.2
PDLIM5-209ENST00000506632 TRAV40A0A0B4J280 105 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 A0A0U1RQV5 110 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 hCG_1807616A0A1W2PRN6 198 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 DNAJC9-AS1A6NH13 148 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 SRRM5B3KS81 715 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 CLDN34H7C241 214 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 SRSF10O75494 262 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 ATP5HO75947 161 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 GYPAP02724 150 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 MUC1P15941 1255 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 AMY2BP19961 511 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 PRTN3P24158 256 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 FASP25445 335 aa7.52□□□□□ -1.21
PDLIM5-209ENST00000506632 GNALP38405 381 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms