RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ELF3P78545 371 aaPredicted RBP14.05□□□□□ -0.16
SNCA-209ENST00000506244 OGFRL1Q5TC84 451 aaPredicted RBP14.05□□□□□ -0.16
SNCA-209ENST00000506244 PRAMEF6Q5VXH4 476 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 SSX6Q7RTT6 188 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 KCTD20Q7Z5Y7 419 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 THAP5Q7Z6K1 395 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 ELMOD2Q8IZ81 293 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 ACBD7Q8N6N7 88 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 SEMA6DQ8NFY4 1073 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 OR51E1Q8TCB6 317 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 CYGBQ8WWM9 190 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 LYZL4Q96KX0 146 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 SOX7Q9BT81 388 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 TRIM36Q9NQ86 728 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 GPR84Q9NQS5 396 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 UFSP2Q9NUQ7 469 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 DCAF16Q9NXF7 216 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 OR52A1Q9UKL2 312 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 RHBDD3Q9Y3P4 386 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 RPL36Q9Y3U8 105 aaKnown RBP14.05□□□□□ -0.16
SNCA-209ENST00000506244 SONP18583 2426 aaKnown RBP14.04□□□□□ -0.16
SNCA-209ENST00000506244 TRAV20A0A0B4J274 112 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 IGHV3-64DA0A0J9YX35 117 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 TMEM210A6NLX4 147 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 DHRS7CA6NNS2 312 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 FAM20BO75063 409 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 DHRS3O75911 302 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 RPP14O95059 124 aaKnown RBP14.04□□□□□ -0.16
SNCA-209ENST00000506244 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
SNCA-209ENST00000506244 CYB5R3P00387 301 aaPredicted RBP14.04□□□□□ -0.16
SNCA-209ENST00000506244 PNPP00491 289 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 IGLV3-1P01715 115 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 TTRP02766 147 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 ACKR3P25106 362 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 RIPPLY1Q0D2K3 151 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 RAB40BQ12829 278 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 PRDX4Q13162 271 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 IL18R1Q13478 541 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 ZMYND11Q15326 602 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 KCNJ8Q15842 424 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 CHRFAM7AQ494W8 412 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 ZNF691Q5VV52 312 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 LIPNQ5VXI9 398 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 LRRC28Q86X40 367 aaPredicted RBP14.04□□□□□ -0.16
SNCA-209ENST00000506244 ZDHHC23Q8IYP9 409 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 DHRSXQ8N5I4 330 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 FAM71F1Q96KD3 344 aaPredicted RBP14.04□□□□□ -0.16
SNCA-209ENST00000506244 HIST1H2AAQ96QV6 131 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 SHARPINQ9H0F6 387 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 G6PC2Q9NQR9 355 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 INPP5EQ9NRR6 644 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 RNF7Q9UBF6 113 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 ENPP5Q9UJA9 477 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 GNG8Q9UK08 70 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 EXOGQ9Y2C4 368 aaKnown RBP14.04□□□□□ -0.16
SNCA-209ENST00000506244 ABCA2Q9BZC7 2435 aa14.04□□□□□ -0.16
SNCA-209ENST00000506244 PPIAL4EA0A075B759 164 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 hCG_1807616A0A1W2PRN6 198 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 FAM157AC9JC47 383 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 PPIAL4DF5H284 164 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 J3QRE1 110 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 DLGAP1O14490 977 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 MAGEB4O15481 346 aaPredicted RBP14.03□□□□□ -0.16
SNCA-209ENST00000506244 PPIAL4FP0DN26 164 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 HOXB4P17483 251 aaPredicted RBP14.03□□□□□ -0.16
SNCA-209ENST00000506244 ZNF85Q03923 595 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 CDONQ4KMG0 1287 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 KLHL22Q53GT1 634 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 ZNF684Q5T5D7 378 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 DOK3Q7L591 496 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 EGFL6Q8IUX8 553 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 CCDC54Q8NEL0 328 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 TMEM186Q96B77 213 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 LGALS12Q96DT0 336 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 ITPKCQ96DU7 683 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 PPIAL4AQ9Y536 164 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 NAV3Q8IVL0 2385 aa14.03□□□□□ -0.16
SNCA-209ENST00000506244 MALRD1Q5VYJ5 2156 aa14.02□□□□□ -0.16
SNCA-209ENST00000506244 A0A1B0GVI7 797 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 IRGMA1A4Y4 181 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 ZNF850A8MQ14 1090 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 H0YAE9 185 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 H0YHG0 523 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 GRPP07492 148 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 UBCP0CG48 685 aaKnown RBP14.02□□□□□ -0.17
SNCA-209ENST00000506244 ISL1P61371 349 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 SLC34A1Q06495 639 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 MPPED2Q15777 294 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 TP53I3Q53FA7 332 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 NLRC3Q7RTR2 1065 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 KRT74Q7RTS7 529 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 CATSPERDQ86XM0 798 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 PIGCQ92535 297 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 POM121Q96HA1 1249 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 ADI1Q9BV57 179 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 BEX2Q9BXY8 128 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 PLEKHA1Q9HB21 404 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 PATZ1Q9HBE1 687 aaKnown RBP14.02□□□□□ -0.17
SNCA-209ENST00000506244 LPAR2Q9HBW0 351 aa14.02□□□□□ -0.17
SNCA-209ENST00000506244 ACOXLQ9NUZ1 547 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms