RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 MRI1Q9BV20 369 aa13.88□□□□□ -0.19
PDLIM7-215ENST00000506161 SLC22A4Q9H015 551 aa13.88□□□□□ -0.19
PDLIM7-215ENST00000506161 MMADHCQ9H3L0 296 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-215ENST00000506161 PAPOLBQ9NRJ5 636 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-215ENST00000506161 CLN8Q9UBY8 286 aa13.88□□□□□ -0.19
PDLIM7-215ENST00000506161 OOEPA6NGQ2 149 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 ADAM20O43506 726 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 HMGN1P05114 100 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 SELLP14151 372 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 PAICSP22234 425 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 PSMA6P60900 246 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 FGF12P61328 243 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 RPS7P62081 194 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 ACTG1P63261 375 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 EFNB1P98172 346 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 MFGE8Q08431 387 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 SNAPC1Q16533 368 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 TEX36Q5VZQ5 186 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 BRD3OSQ6XYD6 125 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 TEX29Q8N6K0 151 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 OR5K1Q8NHB7 308 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 LRRC29Q8WV35 223 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 TECTBQ96PL2 329 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 TBX15Q96SF7 602 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 TEAD3Q99594 435 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 ZNF556Q9HAH1 456 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 FAM206AQ9NX38 181 aa13.87□□□□□ -0.19
PDLIM7-215ENST00000506161 MGAM2Q2M2H8 2515 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 hCG_1807616A0A1W2PRN6 198 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 ANKRD30BLA7E2S9 258 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 ZNF850A8MQ14 1090 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 TRIM77I1YAP6 450 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 PHYHO14832 338 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 MMP9P14780 707 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 POLR2IP36954 125 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 DDOSTP39656 456 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 SLC35D3Q5M8T2 416 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 RHOUQ7L0Q8 258 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 PLPP7Q8NBV4 271 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 OR8S1Q8NH09 359 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 LRTOMTQ8WZ04 291 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 RPL3LQ92901 407 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 NRBF2Q96F24 287 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 PAPOLGQ9BWT3 736 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 TLNRD1Q9H1K6 362 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 WDR13Q9H1Z4 485 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 OR10A2Q9H208 303 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 OPA3Q9H6K4 179 aa13.86□□□□□ -0.19
PDLIM7-215ENST00000506161 CDIPTO14735 213 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 SRSF10O75494 262 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 DLX1P56177 255 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 PRB3Q04118 309 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 PRDX4Q13162 271 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 SCGB2A2Q13296 93 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 PDLIM3Q53GG5 364 aaPredicted RBP13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 SLX4IPQ5VYV7 408 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 C12orf73Q69YU5 71 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 KDM4DQ6B0I6 523 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 PLEKHG7Q6ZR37 379 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 NLRC3Q7RTR2 1065 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 ZNF454Q8N9F8 522 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 SPERTQ8NA61 448 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 OR52H1Q8NGJ2 320 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 PLEKHA8Q96JA3 519 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 CCL13Q99616 98 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 KIF17Q9P2E2 1029 aa13.85□□□□□ -0.19
PDLIM7-215ENST00000506161 ZAR1LA6NP61 321 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 DVL1O14640 695 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 IGLV3-1P01715 115 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 PPIAL4GP0DN37 164 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 CPT2P23786 658 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 FPR2P25090 351 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 DCTDP32321 178 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 CFHR2P36980 270 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 GMFBP60983 142 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 AWAT1Q58HT5 328 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 WDR38Q5JTN6 314 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 AADACL4Q5VUY2 407 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 BTNL3Q6UXE8 466 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 SSX6Q7RTT6 188 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 FAM216BQ8N7L0 139 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 C3orf56Q8N813 242 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 TCEANCQ8N8B7 351 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 OR5T2Q8NGG2 359 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 OR5P3Q8WZ94 311 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 PIGCQ92535 297 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 DUS3LQ96G46 650 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 PKP2Q99959 881 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 YIPF3Q9GZM5 350 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 GABARAPL1Q9H0R8 117 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 SIRPDQ9H106 197 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 YY1AP1Q9H869 796 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 C14orf119Q9NWQ9 140 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 LAMP5Q9UJQ1 280 aa13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 NOP16Q9Y3C1 178 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-215ENST00000506161 TRAV38-1A0A0B4J264 116 aa13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-215ENST00000506161 SRRM5B3KS81 715 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms