RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 LMX1BO60663 402 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 CDC14BO60729 498 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 LILRA1O75019 489 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 ENTPD6O75354 484 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 TNFAIP8O95379 198 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 LY6G6DO95868 133 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 MUC1P15941 1255 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-220ENST00000505005 MYL12AP19105 171 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 CA6P23280 308 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 THBS2P35442 1172 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 POLR2IP36954 125 aaKnown RBP8.34□□□□□ -1.07
NR1I3-220ENST00000505005 CFHR2P36980 270 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 RANBP1P43487 201 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 GBX2P52951 348 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-220ENST00000505005 BTG1P62324 171 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 GALEQ14376 348 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 CCDC58Q4VC31 144 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 CD276Q5ZPR3 534 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 FDX2Q6P4F2 183 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 LYPD4Q6UWN0 246 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 NAA40Q86UY6 237 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 LRRC28Q86X40 367 aaPredicted RBP8.34□□□□□ -1.07
NR1I3-220ENST00000505005 ZDHHC23Q8IYP9 409 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 ENTHD1Q8IYW4 607 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 BHLHE23Q8NDY6 225 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 OR56B2PQ8NGI1 322 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 OR10Z1Q8NGY1 313 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 ITLN1Q8WWA0 313 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 CYGBQ8WWM9 190 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 PP6455Q8WZ26 134 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 C12orf43Q96C57 262 aaKnown RBP8.34□□□□□ -1.07
NR1I3-220ENST00000505005 PAPOLGQ9BWT3 736 aaKnown RBP8.34□□□□□ -1.07
NR1I3-220ENST00000505005 JAM3Q9BX67 310 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 COMMD4Q9H0A8 199 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 SHARPINQ9H0F6 387 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 DNTTIP1Q9H147 329 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 ZNF696Q9H7X3 374 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 PLEKHA1Q9HB21 404 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 BRD7Q9NPI1 651 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 YAE1D1Q9NRH1 226 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 FAM206AQ9NX38 181 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 SLC7A11Q9UPY5 501 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 WIPI2Q9Y4P8 454 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 PPIAL4AQ9Y536 164 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 HIVEP2P31629 2446 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 DYSFO75923 2080 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
NR1I3-220ENST00000505005 FLNAP21333 2647 aaKnown RBP8.33□□□□□ -1.08
NR1I3-220ENST00000505005 A0A096LNT2 108 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 A0A1W2PQL4 384 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-220ENST00000505005 NCR1O76036 304 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 TGFAP01135 160 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 ISG15P05161 165 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 LIPFP07098 398 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 HTR1AP08908 422 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 SLC2A1P11166 492 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 DBTP11182 482 aaKnown RBP8.33□□□□□ -1.08
NR1I3-220ENST00000505005 GNG3P63215 75 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 GFOD2Q3B7J2 385 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 CEACAM21Q3KPI0 293 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 CHRFAM7AQ494W8 412 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 CDONQ4KMG0 1287 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 ESCO2Q56NI9 601 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 CLVS2Q5SYC1 327 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 C6orf52Q5T4I8 152 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF684Q5T5D7 378 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF691Q5VV52 312 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 LIPNQ5VXI9 398 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 OTPQ5XKR4 325 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 Q6ZR03 302 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 DCDC5Q6ZRR9 648 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF573Q86YE8 665 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 OR8B12Q8NGG6 310 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 OR2AE1Q8NHA4 323 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 YIPF5Q969M3 257 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 SIGLEC11Q96RL6 698 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 MBOAT4Q96T53 435 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 BEX2Q9BXY8 128 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF665Q9H7R5 613 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 SCN3BQ9NY72 215 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 RASL12Q9NYN1 266 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 CNOT2Q9NZN8 540 aaKnown RBP8.33□□□□□ -1.08
NR1I3-220ENST00000505005 GNG8Q9UK08 70 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 GTF2A1LQ9UNN4 478 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 SLC22A13Q9Y226 551 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 POLDIP2Q9Y2S7 368 aa8.33□□□□□ -1.08
NR1I3-220ENST00000505005 EXOSC1Q9Y3B2 195 aaKnown RBP8.33□□□□□ -1.08
NR1I3-220ENST00000505005 TANC2Q9HCD6 1990 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 IGHV4-61A0A0C4DH41 118 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 A0A0G2JMP0 313 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 A0A0X1KG70 313 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 LRP5LA4QPB2 252 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 A6NLC8 198 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 TMEM212A6NML5 194 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 F5H5P2 479 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 SYT7O43581 403 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 LY6HO94772 140 aa8.32□□□□□ -1.08
NR1I3-220ENST00000505005 ECDO95905 644 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms