RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CSNK2A3Q8NEV1 391 aa13.96□□□□□ -0.17
SCLT1-205ENST00000503401 PIMREGQ9BSJ6 248 aa13.96□□□□□ -0.17
SCLT1-205ENST00000503401 CHODLQ9H9P2 273 aa13.96□□□□□ -0.17
SCLT1-205ENST00000503401 FKBP14Q9NWM8 211 aa13.96□□□□□ -0.17
SCLT1-205ENST00000503401 PIGLQ9Y2B2 252 aa13.96□□□□□ -0.17
SCLT1-205ENST00000503401 ZNF850A8MQ14 1090 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 LMX1BO60663 402 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 DHRS3O75911 302 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 ACHEP22303 614 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 MAP2K3P46734 347 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 RIN1Q13671 783 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 PRAMEF6Q5VXH4 476 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 XAF1Q6GPH4 301 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 KLHL36Q8N4N3 616 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 SEMA6DQ8NFY4 1073 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 ZNF420Q8TAQ5 688 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-205ENST00000503401 GATAD2BQ8WXI9 593 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 PIGCQ92535 297 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 MYCBPQ99417 103 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-205ENST00000503401 REG4Q9BYZ8 158 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 SLC22A4Q9H015 551 aa13.95□□□□□ -0.18
SCLT1-205ENST00000503401 CAB39Q9Y376 341 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-205ENST00000503401 YLPM1P49750 1951 aaKnown RBP13.94□□□□□ -0.18
SCLT1-205ENST00000503401 A0A1B0GVI7 797 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 LOC107986453A0A1B0GWG9 222 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 SYT7O43581 403 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 GMDSO60547 372 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 TNFRSF1AP19438 455 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 SRP9P49458 86 aaKnown RBP13.94□□□□□ -0.18
SCLT1-205ENST00000503401 MRPS11P82912 194 aaKnown RBP13.94□□□□□ -0.18
SCLT1-205ENST00000503401 RIPPLY1Q0D2K3 151 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 PRDX4Q13162 271 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 ALKBH1Q13686 389 aaKnown RBP13.94□□□□□ -0.18
SCLT1-205ENST00000503401 HFEQ30201 348 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 FDX2Q6P4F2 183 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 TMPRSS11AQ6ZMR5 421 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 MOGAT3Q86VF5 341 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 KLBQ86Z14 1044 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 PLPP7Q8NBV4 271 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 OR14K1Q8NGZ2 314 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 OR8S1Q8NH09 359 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 GCM1Q9NP62 436 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 UFSP2Q9NUQ7 469 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 CHCHD3Q9NX63 227 aaKnown RBP13.94□□□□□ -0.18
SCLT1-205ENST00000503401 SCN3BQ9NY72 215 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 PPP1R3CQ9UQK1 317 aa13.94□□□□□ -0.18
SCLT1-205ENST00000503401 LOC100289279A0A1B0GTE1 492 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 VWC2LB2RUY7 222 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 NDUFS8O00217 210 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 PPIHO43447 177 aaKnown RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 MTRF1O75570 445 aaKnown RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 LALBAP00709 142 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CDK1P06493 297 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CCL1P22362 96 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 GIFP27352 417 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 GNALP38405 381 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 NR4A2P43354 598 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 GBX2P52951 348 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CSNK2BP67870 215 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 MPPED2Q15777 294 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CEP78Q5JTW2 689 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 DOK3Q7L591 496 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 FTMTQ8N4E7 242 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 OR10AC1Q8NH08 325 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 PDCD1LG2Q9BQ51 273 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 TMUB1Q9BVT8 246 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 NARFLQ9H6Q4 476 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 DLL4Q9NR61 685 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 UBAP1Q9NZ09 502 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 ERVK-18Q9QC07 812 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 V9GYS6 101 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 TLN2Q9Y4G6 2542 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CSPG4Q6UVK1 2322 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 A0A096LNT2 108 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 ZNF816-ZNF321PA0A0X1KG74 233 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 OR4C45A6NMZ5 311 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CST4P01036 141 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 GRPP07492 148 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 UBCP0CG48 685 aaKnown RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CD99P14209 185 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 SLC25A16P16260 332 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 CD200P41217 278 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 SLC35A2P78381 396 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 HOXA4Q00056 320 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 MED21Q13503 144 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 DOC2BQ14184 412 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 AVPI1Q5T686 147 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 ITPKCQ96DU7 683 aa13.93□□□□□ -0.18
SCLT1-205ENST00000503401 FGF23Q9GZV9 251 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 NOP16Q9Y3C1 178 aaKnown RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 SIRT4Q9Y6E7 314 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-205ENST00000503401 IGHV4-61A0A0C4DH41 118 aa13.92□□□□□ -0.18
SCLT1-205ENST00000503401 WNT9BO14905 357 aa13.92□□□□□ -0.18
SCLT1-205ENST00000503401 CCDC159P0C7I6 412 aa13.92□□□□□ -0.18
SCLT1-205ENST00000503401 ATP6V1B1P15313 513 aa13.92□□□□□ -0.18
SCLT1-205ENST00000503401 CRHBPP24387 322 aa13.92□□□□□ -0.18
SCLT1-205ENST00000503401 PMELP40967 661 aa13.92□□□□□ -0.18
SCLT1-205ENST00000503401 GPR6P46095 362 aaPredicted RBP13.92□□□□□ -0.18
SCLT1-205ENST00000503401 CCR9P51686 369 aa13.92□□□□□ -0.18
SCLT1-205ENST00000503401 WDR86Q86TI4 376 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms