RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-209ENST00000496445 CLDN34H7C241 214 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 FKBP6O75344 327 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 E2F6O75461 281 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 APOC1P02654 83 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 H2BFMP0C1H6 154 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 MZT1Q08AG7 82 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 POU4F2Q12837 409 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 DNAL1Q4LDG9 190 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 TMEM236Q5W0B7 351 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 RUSC1-AS1Q66K80 236 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 WDR82Q6UXN9 313 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 CPOQ8IVL8 374 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 FGFRL1Q8N441 504 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 PAPD5Q8NDF8 572 aaKnown RBP11.83□□□□□ -0.52
VTI1A-209ENST00000496445 OR1M1Q8NGA1 313 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 TAF15Q92804 592 aaKnown RBP eCLIP11.83□□□□□ -0.52
VTI1A-209ENST00000496445 ITPKCQ96DU7 683 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 PGAM5Q96HS1 289 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 LYZL4Q96KX0 146 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 TBX15Q96SF7 602 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 PAPOLGQ9BWT3 736 aaKnown RBP11.83□□□□□ -0.52
VTI1A-209ENST00000496445 FGF23Q9GZV9 251 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-209ENST00000496445 TLNRD1Q9H1K6 362 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 RASSF4Q9H2L5 321 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 SP140LQ9H930 580 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 SLC25A19Q9HC21 320 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 TRIM36Q9NQ86 728 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 POMPQ9Y244 141 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 PCDHGB1Q9Y5G3 927 aa11.83□□□□□ -0.52
VTI1A-209ENST00000496445 ZNF879B4DU55 563 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 GYG2O15488 501 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 NDUFA2O43678 99 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 ANXA8P13928 327 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 HOXB6P17509 224 aaKnown RBP11.82□□□□□ -0.52
VTI1A-209ENST00000496445 CFL1P23528 166 aaKnown RBP11.82□□□□□ -0.52
VTI1A-209ENST00000496445 MTNR1AP48039 350 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 PSMA6P60900 246 aaKnown RBP11.82□□□□□ -0.52
VTI1A-209ENST00000496445 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 SLC35D3Q5M8T2 416 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 CD276Q5ZPR3 534 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 OR8B12Q8NGG6 310 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 THEM6Q8WUY1 208 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 SEH1LQ96EE3 360 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 PCGF1Q9BSM1 259 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 PRDM13Q9H4Q3 707 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 RGCCQ9H4X1 137 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 ZNF556Q9HAH1 456 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 DNAJB9Q9UBS3 223 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 LRP12Q9Y561 859 aa11.82□□□□□ -0.52
VTI1A-209ENST00000496445 CCDC182A6NF36 153 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 PRR32B1ATL7 298 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 DVL1O14640 695 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 TIPRLO75663 272 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 HMGN1P05114 100 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 HCCSP53701 268 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 FOXL1Q12952 345 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 WDR38Q5JTN6 314 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 BTN2A1Q7KYR7 527 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 CSNK2A3Q8NEV1 391 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 BCAS4Q8TDM0 211 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 HPSE2Q8WWQ2 592 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 SLC25A28Q96A46 364 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 ZNF747Q9BV97 191 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 SIRPDQ9H106 197 aa11.81□□□□□ -0.52
VTI1A-209ENST00000496445 CENPVL3A0A0U1RRI6 287 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 ZNF850A8MQ14 1090 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 SRRM5B3KS81 715 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 P2RY10O00398 339 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 CDIPTO14735 213 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 TMPRSS2O15393 492 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 DNAJC8O75937 253 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 TOX4O94842 621 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 MUC1P15941 1255 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 ALOX5APP20292 161 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 GNALP38405 381 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 RPS7P62081 194 aaKnown RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 PRDX4Q13162 271 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 APOFQ13790 326 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 GPR157Q5UAW9 335 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 FAHD1Q6P587 224 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 GALNT4Q8N4A0 578 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 FAM216BQ8N7L0 139 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 ST8SIA4Q92187 359 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 UTP4Q969X6 686 aaKnown RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 WDFY2Q96P53 400 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 CCL13Q99616 98 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 CADM1Q9BY67 442 aaKnown RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 YY1AP1Q9H869 796 aa11.8□□□□□ -0.52
VTI1A-209ENST00000496445 PAPOLBQ9NRJ5 636 aaKnown RBP11.8□□□□□ -0.52
VTI1A-209ENST00000496445 CST4P01036 141 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 LIPFP07098 398 aa11.79□□□□□ -0.52
VTI1A-209ENST00000496445 MRPL3P09001 348 aaKnown RBP11.79□□□□□ -0.52
VTI1A-209ENST00000496445 AMY2BP19961 511 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms