RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.08	□□□□□ -0.8
APTX-233	ENST00000496030	YIPF5	Q969M3	257 aa		10.08	□□□□□ -0.8
APTX-233	ENST00000496030	MOB1A	Q9H8S9	216 aa		10.08	□□□□□ -0.8
APTX-233	ENST00000496030	BARX1	Q9HBU1	254 aa	Predicted RBP	10.08	□□□□□ -0.8
APTX-233	ENST00000496030	TMEM100	Q9NV29	134 aa		10.08	□□□□□ -0.8
APTX-233	ENST00000496030	MRPL15	Q9P015	296 aa	Known RBP	10.08	□□□□□ -0.8
APTX-233	ENST00000496030	ERVK-18	Q9QC07	812 aa		10.08	□□□□□ -0.8
APTX-233	ENST00000496030	ZNF391	Q9UJN7	358 aa		10.08	□□□□□ -0.8
APTX-233	ENST00000496030	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.08	□□□□□ -0.8
APTX-233	ENST00000496030	RHBDD3	Q9Y3P4	386 aa		10.08	□□□□□ -0.8
APTX-233	ENST00000496030	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.08	□□□□□ -0.8
APTX-233	ENST00000496030	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
APTX-233	ENST00000496030	LOC390937	A0A1W2PQ73	354 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	PTGES3L	E9PB15	166 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	P2RY10	O00398	339 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	PHF1	O43189	567 aa	Predicted RBP	10.07	□□□□□ -0.8
APTX-233	ENST00000496030	RP2	O75695	350 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	MT-ND5	P03915	603 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	HTR1A	P08908	422 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	DAO	P14920	347 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	RBMX	P38159	391 aa	Known RBP	10.07	□□□□□ -0.8
APTX-233	ENST00000496030	GTF2A1	P52655	376 aa	Predicted RBP	10.07	□□□□□ -0.8
APTX-233	ENST00000496030	FAM209A	Q5JX71	171 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	FAM220A	Q7Z4H9	259 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	RDH10	Q8IZV5	341 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	ZNF786	Q8N393	782 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	NANOGP1	Q8N7R0	232 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	OR2Z1	Q8NG97	314 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	OR10AD1	Q8NGE0	317 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	OR14K1	Q8NGZ2	314 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	OR52N1	Q8NH53	320 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	RPS4Y2	Q8TD47	263 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	UBASH3B	Q8TF42	649 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	ELMOD3	Q96FG2	381 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	DIRC2	Q96SL1	478 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	CDCA4	Q9BXL8	241 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	BABAM2	Q9NXR7	383 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	GTF2A1L	Q9UNN4	478 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	LRRC42	Q9Y546	428 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030		V9GYS6	101 aa		10.07	□□□□□ -0.8
APTX-233	ENST00000496030	DYSF	O75923	2080 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	MEGF8	Q7Z7M0	2845 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030		F5H5P2	479 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	OGG1	O15527	345 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	LMX1B	O60663	402 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	PTBP3	O95758	552 aa	Known RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	CST4	P01036	141 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	ISG15	P05161	165 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	ATP6V1B1	P15313	513 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	MYL12A	P19105	171 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	CRYBB2	P43320	205 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	TGM4	P49221	684 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	MRPS11	P82912	194 aa	Known RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	TNFAIP6	P98066	277 aa	Predicted RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	MAB21L1	Q13394	359 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	ALKBH1	Q13686	389 aa	Known RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	CLEC12B	Q2HXU8	276 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	ODF4	Q2M2E3	257 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	ZMAT1	Q5H9K5	638 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	STX19	Q8N4C7	294 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	KLHL36	Q8N4N3	616 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	MAPK1IP1L	Q8NDC0	245 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	CSNK2A3	Q8NEV1	391 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	OR10AC1	Q8NH08	325 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	C10orf105	Q8TEF2	133 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	GATAD2B	Q8WXI9	593 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	ITFG2	Q969R8	447 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	MRPL48	Q96GC5	212 aa	Known RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	FAM71F1	Q96KD3	344 aa	Predicted RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	MYCBP	Q99417	103 aa	Predicted RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	FGF23	Q9GZV9	251 aa	Predicted RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	SCN3B	Q9NY72	215 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	IL19	Q9UHD0	177 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	LSM2	Q9Y333	95 aa	Known RBP	10.06	□□□□□ -0.8
APTX-233	ENST00000496030	CACNG2	Q9Y698	323 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	TANC2	Q9HCD6	1990 aa		10.06	□□□□□ -0.8
APTX-233	ENST00000496030	IGHV4-30-2	A0A087WSY4	118 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030		A0A096LNT2	108 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	LOC100289279	A0A1B0GTE1	492 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	VWC2L	B2RUY7	222 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	HAX1	O00165	279 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	GMDS	O60547	372 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	DHRS3	O75911	302 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	ZFPL1	O95159	310 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	MT-ND2	P03891	347 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	ERCC1	P07992	297 aa	Predicted RBP	10.05	□□□□□ -0.8
APTX-233	ENST00000496030	GIF	P27352	417 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	PMEL	P40967	661 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	MAP2K3	P46734	347 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	GBX2	P52951	348 aa	Predicted RBP	10.05	□□□□□ -0.8
APTX-233	ENST00000496030	MRPL28	Q13084	256 aa	Known RBP	10.05	□□□□□ -0.8
APTX-233	ENST00000496030	RIN1	Q13671	783 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	KRTAP24-1	Q3LI83	254 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	CCDC58	Q4VC31	144 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	RBM48	Q5RL73	367 aa	Known RBP	10.05	□□□□□ -0.8
APTX-233	ENST00000496030	TMEM42	Q69YG0	159 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	TMPRSS11A	Q6ZMR5	421 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	WDR86	Q86TI4	376 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	KLB	Q86Z14	1044 aa		10.05	□□□□□ -0.8
APTX-233	ENST00000496030	ITLN1	Q8WWA0	313 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms