RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 OAFQ86UD1 273 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 C17orf78Q8N4C9 275 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 ZIC4Q8N9L1 334 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 AQP11Q8NBQ7 271 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 OR51A7Q8NH64 312 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 ZHX1-C8orf76Q96EF9 292 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 CMTM3Q96MX0 182 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 ZNF385AQ96PM9 386 aaKnown RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 NIPSNAP1Q9BPW8 284 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 RBM4BQ9BQ04 359 aaKnown RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 RBM4Q9BWF3 364 aaKnown RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 TAPBPLQ9BX59 468 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 NANSQ9NR45 359 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 OR14J1Q9UGF5 321 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 HDGFL3Q9Y3E1 203 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 LRP12Q9Y561 859 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 ORC6Q9Y5N6 252 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 FLVCR1Q9Y5Y0 555 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 SPIN1Q9Y657 262 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 MAGEA13PA6NCF6 341 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 F5H0A9 414 aaPredicted RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 CDC42EP2O14613 210 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 EI24O14681 340 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 SPINT2O43291 252 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 OR2T1O43869 369 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 NPIPB7O75200 414 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 AKR7A3O95154 331 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 OR6A2O95222 327 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 VENTXO95231 258 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 SNAP29O95721 258 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 BGLAPP02818 100 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 OR4A8P0C604 315 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 AHCYP23526 432 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 GRPRP30550 384 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 POLR2IP36954 125 aaKnown RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 SRP14P37108 136 aaKnown RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 VHLP40337 213 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 GSSP48637 474 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 IDH3GP51553 393 aaPredicted RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 ALDH3A2P51648 485 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 TGFBR3Q03167 851 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 COX10Q12887 443 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 TSPAN31Q12999 210 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 PMS2P3Q13401 168 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 SLC17A1Q14916 467 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 ADIPOQQ15848 244 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 ZNF74Q16587 644 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 MS4A18Q3C1V0 323 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 ZBED5Q49AG3 693 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 ARFGEF3Q5TH69 2177 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 TMEM236Q5W0B7 351 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 KDM4DQ6B0I6 523 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 TMEM225Q6GV28 225 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 FAHD1Q6P587 224 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 GLDNQ6ZMI3 551 aaPredicted RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 SATL1Q86VE3 508 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 EPHX4Q8IUS5 362 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 ZCCHC24Q8N2G6 241 aaKnown RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 KDM8Q8N371 416 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 TMEM99Q8N816 258 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 ZNF540Q8NDQ6 660 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 MOSPD2Q8NHP6 518 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 MFSD8Q8NHS3 518 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 SAMD8Q96LT4 415 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 DUX5Q96PT3 197 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 NAA11Q9BSU3 229 aaPredicted RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 ZNF426Q9BUY5 554 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 SLC19A3Q9BZV2 496 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 PLK3Q9H4B4 646 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 MYOZ1Q9NP98 299 aaPredicted RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 CA10Q9NS85 328 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 SEC14L4Q9UDX3 406 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 IL20RAQ9UHF4 553 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 TRAPPC4Q9Y296 219 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 TMEM5Q9Y2B1 443 aa5.44□□□□□ -1.54
VIM-207ENST00000495528 HEATR1Q9H583 2144 aaKnown RBP5.44□□□□□ -1.54
VIM-207ENST00000495528 TRAV27A0A087WT01 109 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 HTR3EA5X5Y0 456 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 FTCDNL1E5RQL4 147 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 ZNF587BE7ETH6 402 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 C11orf98E9PRG8 122 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 LYNX1G3V0Z9 82 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 H3BN98 237 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 M0QZ24 198 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 PLPP3O14495 311 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 EIF1BO60739 113 aaKnown RBP5.43□□□□□ -1.54
VIM-207ENST00000495528 SOX14O95416 240 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 TACSTD2P09758 323 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 ADORA3P0DMS8 318 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 LYNX1P0DP58 116 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 GSTM3P21266 225 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 GIFP27352 417 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 GTF2E2P29084 291 aaKnown RBP5.43□□□□□ -1.54
VIM-207ENST00000495528 EPHA2P29317 976 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 CALCRP30988 508 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 RPL4P36578 427 aaKnown RBP5.43□□□□□ -1.54
VIM-207ENST00000495528 AQP2P41181 271 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 PPOXP50336 477 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 CRISP1P54107 249 aa5.43□□□□□ -1.54
VIM-207ENST00000495528 RAD23AP54725 363 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms