RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SLC35B4Q969S0 331 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 MCHR2Q969V1 340 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 ORAI1Q96D31 301 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 SLC25A44Q96H78 314 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 OR52B2Q96RD2 323 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 MCHR1Q99705 422 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 GPA33Q99795 319 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM109Q9BVC6 243 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 BCL2L14Q9BZR8 327 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 OR2J1Q9GZK6 312 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 RAD21L1Q9H4I0 556 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 NANSQ9NR45 359 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 SDR39U1Q9NRG7 319 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 HAO2Q9NYQ3 351 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 EIF3KQ9UBQ5 218 aaKnown RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 KLHL21Q9UJP4 597 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 PURGQ9UJV8 347 aaKnown RBP4.3□□□□□ -1.72
PTCD3-219ENST00000494323 FBXL3Q9UKT7 428 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 NPTNQ9Y639 398 aa4.3□□□□□ -1.72
PTCD3-219ENST00000494323 IGKV1D-43A0A0B4J1Z2 117 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 MDFIC2A0A1B0GVS7 189 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 ZSCAN5BA6NJL1 495 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 M0QX08 132 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 SNNO75324 88 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 FOXH1O75593 365 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 SERPINB7O75635 380 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 MFN2O95140 757 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 SLC2A10O95528 541 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 SNAP29O95721 258 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 MT-ATP6P00846 226 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PTHP01270 115 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 OPN1SWP03999 348 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 MMP7P09237 267 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PGA4P0DJD7 388 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PGA3P0DJD8 388 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV4-38-2P0DP08 117 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF32P17041 273 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 BDKRB2P30411 391 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 CD80P33681 288 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 WNT5AP41221 380 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 ATP4BP51164 291 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 ERVK-25P63136 954 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 TNFAIP6P98066 277 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PSG4Q00888 419 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 FADDQ13158 208 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF74Q16587 644 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PAGE3Q5JUK9 113 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 C16orf87Q6PH81 154 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 TTC33Q6PID6 262 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 RANBP3LQ86VV4 465 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 FUNDC1Q8IVP5 155 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 KIRREL3Q8IZU9 778 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 KIR3DL3Q8N743 410 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 OR52E2Q8NGJ4 325 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 OR6T1Q8NGN1 323 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 VANGL1Q8TAA9 524 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 KLF14Q8TD94 323 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 NSMAFQ92636 917 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 POP5Q969H6 163 aaKnown RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 TMIGD2Q96BF3 282 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 POM121L2Q96KW2 1035 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 ZNF607Q96SK3 696 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 SLC25A33Q9BSK2 321 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 TMEM43Q9BTV4 400 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 ABHD6Q9BV23 337 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 EGLN1Q9GZT9 426 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 IKZF5Q9H5V7 419 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 SIAEQ9HAT2 523 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PATZ1Q9HBE1 687 aaKnown RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 CCNB1IP1Q9NPC3 277 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 TCF7L2Q9NQB0 619 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PLEK2Q9NYT0 353 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 CCDC167Q9P0B6 97 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PDP1Q9P0J1 537 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 VAPAQ9P0L0 249 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 SLC7A7Q9UM01 511 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 INSIG2Q9Y5U4 225 aa4.29□□□□□ -1.72
PTCD3-219ENST00000494323 V9GYY5 206 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-219ENST00000494323 PPIAL4EA0A075B759 164 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 PPIAL4CA0A0B4J2A2 164 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV3-64DA0A0J9YX35 117 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 A0A1W2PP11 408 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 A0A1W2PRG6 482 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 PRORSD1PA6NEY8 169 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 PPIAL4DF5H284 164 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 SPINT2O43291 252 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 MGRN1O60291 552 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 FMO6PO60774 539 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ENTPD5O75356 428 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 TRMUO75648 421 aaKnown RBP4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GAGE7O76087 117 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 LYPD3O95274 346 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV2-70P01814 119 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 IGHG1P01857 330 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 IGHMP01871 453 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 ASAH2BP0C7U1 165 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GAGE12FP0CL80 117 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GAGE12GP0CL81 117 aa4.28□□□□□ -1.72
PTCD3-219ENST00000494323 GAGE12IP0CL82 117 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms