RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 RNPS1Q15287 305 aaKnown RBP17.22■□□□□ 0.35
COL27A1-207ENST00000494090 SPANXN5Q5MJ07 72 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 OR52B4Q8NGK2 314 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 UMAD1C9J7I0 102 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 BCL2L11O43521 198 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 PHYHD1Q5SRE7 291 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 TEX261Q6UWH6 196 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 MAMSTRQ6ZN01 415 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 FOXB1Q99853 325 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 SUCNR1Q9BXA5 334 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 U3KQ87 197 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 ABCA3Q99758 1704 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 GLI4P10075 376 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 ATF1P18846 271 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 ZBTB37Q5TC79 503 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 CCDC71Q8IV32 467 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-207ENST00000494090 PPP1R1CQ8WVI7 109 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 WDR89Q96FK6 387 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-207ENST00000494090 C10orf90Q96M02 699 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 OR2C1O95371 312 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 EMP3P54852 163 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 OR1C1Q15619 314 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 MPPED2Q15777 294 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 ST8SIA2Q92186 375 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 GAB2Q9UQC2 676 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 ST3GAL6Q9Y274 331 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 LIMS3P0CW19 117 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 LIMS4P0CW20 117 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 HYAL1Q12794 435 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 CEACAM16Q2WEN9 425 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 OTPQ5XKR4 325 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 ZNF485Q8NCK3 441 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 LRP12Q9Y561 859 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 LAMB2P55268 1798 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 AQP7O14520 342 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 ZNF354AO60765 605 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-207ENST00000494090 SPSB1Q96BD6 273 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 PCBP3P57721 371 aaKnown RBP17.21■□□□□ 0.35
COL27A1-207ENST00000494090 TLE1Q04724 770 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 URGCP-MRPS24S4R325 110 aa17.21■□□□□ 0.35
COL27A1-207ENST00000494090 TRGV10A0A0A0MS01 117 aa17.21■□□□□ 0.34
COL27A1-207ENST00000494090 PYCARD-AS1I3L0S3 204 aa17.21■□□□□ 0.34
COL27A1-207ENST00000494090 FABP6P51161 128 aa17.21■□□□□ 0.34
COL27A1-207ENST00000494090 LINC01555Q8NAE3 123 aa17.21■□□□□ 0.34
COL27A1-207ENST00000494090 NMES1Q9C002 83 aa17.21■□□□□ 0.34
COL27A1-207ENST00000494090 COX5AP20674 150 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 AANATQ16613 207 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 FAM162BQ5T6X4 162 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 CHRDL1Q9BU40 450 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 C20orf141Q9NUB4 165 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 H7BYZ3 331 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 SSSCA1O60232 199 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 BAMBIQ13145 260 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 ZNF239Q16600 458 aaKnown RBP17.2■□□□□ 0.34
COL27A1-207ENST00000494090 ABI3BPQ7Z7G0 1075 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 AMER3Q8N944 861 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 TGOLN2O43493 480 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 GUCA2AQ02747 115 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 ARRDC1Q8N5I2 433 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 OR1F12Q8NHA8 337 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 ROBO4Q8WZ75 1007 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 DNAJB12Q9NXW2 375 aaKnown RBP17.2■□□□□ 0.34
COL27A1-207ENST00000494090 NDUFB6O95139 128 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 MT-CO3P00414 261 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 RAB35Q15286 201 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM128Q5BJH2 165 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 RPUSD3Q6P087 351 aaKnown RBP17.2■□□□□ 0.34
COL27A1-207ENST00000494090 SSX9Q7RTT3 188 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 OR1J1Q8NGS3 322 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-207ENST00000494090 GALMQ96C23 342 aa17.2■□□□□ 0.34
COL27A1-207ENST00000494090 IGHV3-15A0A0B4J1V0 119 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 RAG2P55895 527 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 PIGPP57054 158 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 PELI1Q96FA3 418 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 CHST6Q9GZX3 395 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 OR2W5A6NFC9 320 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 PPP5D1E7EU14 171 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 FOSL1P15407 271 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 LRRC10Q5BKY1 277 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 BTNL8Q6UX41 500 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 FAM221AA4D161 298 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 RFPL4AA6NLU0 287 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 RFPL4AL1F8VTS6 287 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 DCTN6O00399 190 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 OR5G3P0C626 314 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 JMJD6Q6NYC1 403 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-207ENST00000494090 GPR119Q8TDV5 335 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 RTN4IP1Q8WWV3 396 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-207ENST00000494090 OIT3Q8WWZ8 545 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 FBXW5Q969U6 566 aa17.19■□□□□ 0.34
COL27A1-207ENST00000494090 YBX1P67809 324 aaKnown RBP17.19■□□□□ 0.34
COL27A1-207ENST00000494090 PLEKHB1Q9UF11 243 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-207ENST00000494090 LY86O95711 162 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 RAB1AP62820 205 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 PRICKLE4Q2TBC4 344 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM215Q68D42 235 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 Q6ZS52 159 aa17.18■□□□□ 0.34
COL27A1-207ENST00000494090 ADGRL4Q9HBW9 690 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms