RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 SPEGQ15772 3267 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A1W2PN81 502 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 FAM183AA6NL82 134 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 M0R233 179 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CLDN4O14493 209 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 MID1O15344 667 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SPRY1O43609 319 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PITX3O75364 302 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 IGHG3P01860 377 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CXCL10P02778 98 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR8G3PP0DMU2 310 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 BDKRB2P30411 391 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 BMI1P35226 326 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CHRNA7P36544 502 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CA7P43166 264 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DHPSP49366 369 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 RAB28P51157 221 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SMSP52788 366 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRRX1P54821 245 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 RAP1BP61224 184 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPS23P62266 143 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SNRPD2P62316 118 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 RHOGP84095 191 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CXCL9Q07325 125 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PJVKQ0ZLH3 352 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CARTPTQ16568 116 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CHRFAM7AQ494W8 412 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TRMT12Q53H54 448 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 MESTQ5EB52 335 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF766Q5HY98 468 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 RBPMS2Q6ZRY4 209 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 MDGA2Q7Z553 956 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMPRSS11BQ86T26 416 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 RBM45Q8IUH3 476 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 WDFY1Q8IWB7 410 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF441Q8N8Z8 693 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM104Q8NE00 496 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2V1Q8NHB1 315 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 MAL2Q969L2 176 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC41A3Q96GZ6 507 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 LYZL4Q96KX0 146 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ADAD1Q96M93 576 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ERMAPQ96PL5 475 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 LPAR4Q99677 370 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PIGQQ9BRB3 760 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PAAF1Q9BRP4 392 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TCEAL7Q9BRU2 100 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PNRC2Q9NPJ4 139 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 LIN7CQ9NUP9 197 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 VPS29Q9UBQ0 182 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 KCNK6Q9Y257 313 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DYNC2H1Q8NCM8 4307 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DOCK9Q9BZ29 2069 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A087WV48 116 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A1B0GVT2 93 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 FAM230AA0A1W2PPH8 454 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF879B4DU55 563 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DVL1O14640 695 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CHST10O43529 356 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CIDEAO60543 219 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PAK4O96013 591 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 MT-ND4LP03901 98 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 AVPR2P30518 371 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ARHGDIAP52565 204 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TAS2R20P59543 309 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SPIBQ01892 262 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2B11Q5JQS5 317 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPL22L1Q6P5R6 122 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF613Q6PF04 617 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 FBXO46Q6PJ61 603 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 FAM131AQ6UXB0 335 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 GCNT7Q6ZNI0 430 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 APOBEC3FQ8IUX4 373 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 UEVLDQ8IX04 471 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM116Q8NCL8 245 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 WFDC5Q8TCV5 224 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM186Q96B77 213 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 MSANTD3Q96H12 275 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 IMMP2LQ96T52 175 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CD180Q99467 661 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZBTB18Q99592 522 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ING2Q9H160 280 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLCO5A1Q9H2Y9 848 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 METTL17Q9H7H0 456 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 IL36AQ9UHA7 158 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DKKL1Q9UK85 242 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 FBXL4Q9UKA2 621 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SPACA6W5XKT8 324 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 HUWE1Q7Z6Z7 4374 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 HEATR5AQ86XA9 2040 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A0D9SEW6 157 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TRBV2A0A0J9YWF9 115 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SH2D7A6NKC9 451 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 H3BN98 237 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 GPR31O00270 319 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 IFNA14P01570 189 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 BCHEP06276 602 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CISD3P0C7P0 127 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CYBAP13498 195 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DGKAP23743 735 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms