RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 DCTDP32321 178 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 TTKP33981 857 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF121P58317 390 aaPredicted RBP10.42□□□□□ -0.74
UPF3A-210ENST00000493727 MFGE8Q08431 387 aaPredicted RBP10.42□□□□□ -0.74
UPF3A-210ENST00000493727 BCL2L15Q5TBC7 163 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 UBE2UQ5VVX9 321 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 RPL22L1Q6P5R6 122 aaKnown RBP10.42□□□□□ -0.74
UPF3A-210ENST00000493727 CLEC2AQ6UVW9 174 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 DRAM2Q6UX65 266 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 FAM57BQ71RH2 274 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 COMMD2Q86X83 199 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF584Q8IVC4 421 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 MUC15Q8N387 334 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 ZFP41Q8N8Y5 198 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 IL17RDQ8NFM7 739 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 MUL1Q969V5 352 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 RCC1LQ96I51 464 aaKnown RBP10.42□□□□□ -0.74
UPF3A-210ENST00000493727 DCLRE1CQ96SD1 692 aaKnown RBP10.42□□□□□ -0.74
UPF3A-210ENST00000493727 MGLLQ99685 303 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 AP5S1Q9NUS5 200 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 CRNNQ9UBG3 495 aaPredicted RBP10.42□□□□□ -0.74
UPF3A-210ENST00000493727 OR52A1Q9UKL2 312 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 LOC100509620A0A075B734 347 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 TRBV2A0A0J9YWF9 115 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 TRIM64CA6NLI5 447 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 E9PI62 339 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 IGLV1-44P01699 117 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 ACSM4P0C7M7 580 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 TGM4P49221 684 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 FABP6P51161 128 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 GTF2A1P52655 376 aaPredicted RBP10.41□□□□□ -0.74
UPF3A-210ENST00000493727 BDH1Q02338 343 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 SLC3A1Q07837 685 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 MLLT11Q13015 90 aaPredicted RBP10.41□□□□□ -0.74
UPF3A-210ENST00000493727 ALKBH1Q13686 389 aaKnown RBP10.41□□□□□ -0.74
UPF3A-210ENST00000493727 TSTQ16762 297 aaKnown RBP10.41□□□□□ -0.74
UPF3A-210ENST00000493727 GFOD2Q3B7J2 385 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 CCDC58Q4VC31 144 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 ARMCX4Q5H9R4 360 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 XAF1Q6GPH4 301 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 UNQ6126/PRO20091Q6UXV3 157 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 MYPOPQ86VE0 399 aaPredicted RBP10.41□□□□□ -0.74
UPF3A-210ENST00000493727 CELF2-AS1Q8N7Q2 184 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF676Q8N7Q3 588 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 OR2G2Q8NGZ5 317 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 TMEM158Q8WZ71 300 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 POM121L2Q96KW2 1035 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 C4orf45Q96LM5 186 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 COG8Q96MW5 612 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 CACNG6Q9BXT2 260 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 PBOV1Q9GZY1 135 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 COMMD4Q9H0A8 199 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 OR10A2Q9H208 303 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 OR51B6Q9H340 312 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 ISYNA1Q9NPH2 558 aa10.41□□□□□ -0.74
UPF3A-210ENST00000493727 CGGBP1Q9UFW8 167 aaPredicted RBP10.41□□□□□ -0.74
UPF3A-210ENST00000493727 ACOD1A6NK06 481 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 E7EQL1 145 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 SSX4O60224 188 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 NDUFS7O75251 213 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 LALBAP00709 142 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 CRYAAP02489 173 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 CSF3P09919 207 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 CELP19835 753 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 OTX1P32242 354 aaPredicted RBP10.4□□□□□ -0.74
UPF3A-210ENST00000493727 RGS6P49758 472 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 NAAAQ02083 359 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 ACSM1Q08AH1 577 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 MALLQ13021 153 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 CDK5R1Q15078 307 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 ODF4Q2M2E3 257 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 KRTAP27-1Q3LI81 207 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 WDR38Q5JTN6 314 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 LIPKQ5VXJ0 399 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 CATSPERDQ86XM0 798 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 PAQR4Q8N4S7 273 aaPredicted RBP10.4□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF485Q8NCK3 441 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 ABHD4Q8TB40 342 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF75AQ96N20 296 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 OPALINQ96PE5 141 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 YAE1D1Q9NRH1 226 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 FAM206AQ9NX38 181 aa10.4□□□□□ -0.74
UPF3A-210ENST00000493727 IGHV2OR16-5A0A0B4J2B6 119 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 TMEM212A6NML5 194 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 A8MV72 311 aaPredicted RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 H7C417 338 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 SRSF10O75494 262 aaKnown RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 PNPP00491 289 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 UBCP0CG48 685 aaKnown RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 SLC25A16P16260 332 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 RPL5P46777 297 aaKnown RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 NANOS3P60323 173 aaKnown RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 HGFACQ04756 655 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 SYT6Q5T7P8 510 aaPredicted RBP10.39□□□□□ -0.75
UPF3A-210ENST00000493727 GPR141Q7Z602 305 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 NAA40Q86UY6 237 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 PRSS35Q8N3Z0 413 aa10.39□□□□□ -0.75
UPF3A-210ENST00000493727 OR8B12Q8NGG6 310 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms