RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TCN1P20061 433 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 COX5AP20674 150 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 RPS4Y1P22090 263 aaKnown RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 UQCRC2P22695 453 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ME2P23368 584 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 GRPRP30550 384 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ACAA2P42765 397 aaKnown RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CRATP43155 626 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 OR1E2P47887 323 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 OR3A2P47893 321 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 NPY4RP50391 375 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ERFP50548 548 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 P2RY4P51582 365 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 UGT2B15P54855 530 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CLDN17P56750 224 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CARD18P57730 90 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 RPP38P78345 283 aaKnown RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 IL1RL1Q01638 556 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 FMODQ06828 376 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 NPRL3Q12980 569 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 SELENBP1Q13228 472 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF273Q14593 569 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 FAM189A2Q15884 450 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF141Q15928 474 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 GABRA6Q16445 453 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ACKR1Q16570 336 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 SMU1Q2TAY7 513 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 VPS26BQ4G0F5 336 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 AGKQ53H12 422 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 NCMAPQ5T1S8 102 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 C3orf33Q6P1S2 294 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 NIPAL3Q6P499 406 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CAMKMTQ7Z624 323 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 LRP11Q86VZ4 500 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF100Q8IYN0 542 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 DND1Q8IYX4 353 aaKnown RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 LRRC34Q8IZ02 419 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 RIBC1Q8N443 379 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 RNF148Q8N7C7 305 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF433Q8N7K0 673 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 FAM86B1Q8N7N1 296 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CHDHQ8NE62 594 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 KLHL30-AS1Q8NEE0 82 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 OR9K2Q8NGE7 335 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 OR6K3Q8NGY3 331 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 OR52P1PQ8NH57 321 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 OR5W2Q8NH69 310 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 PFN4Q8NHR9 129 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 PSMA8Q8TAA3 256 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 TAMM41Q96BW9 452 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 NEURL3Q96EH8 262 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 C4orf45Q96LM5 186 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CCDC115Q96NT0 180 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 STACQ99469 402 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ATF6BQ99941 703 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM109Q9BVC6 243 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 TSPYL1Q9H0U9 437 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF385DQ9H6B1 395 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 PTGES2Q9H7Z7 377 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 TPT1P8Q9HAU6 139 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 LPAR2Q9HBW0 351 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 YAE1D1Q9NRH1 226 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ACER3Q9NUN7 267 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 TAS2R1Q9NYW7 299 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ARMCX1Q9P291 453 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CRNNQ9UBG3 495 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 DNAJB9Q9UBS3 223 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 CHRNA9Q9UGM1 479 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 LEF1Q9UJU2 399 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 WBP11Q9Y2W2 641 aaKnown RBP2.37□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF175Q9Y473 711 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 RNF115Q9Y4L5 304 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 FLVCR1Q9Y5Y0 555 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 AP4B1Q9Y6B7 739 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 DSPPQ9NZW4 1301 aa2.37□□□□□ -2.03
PTCD3-218ENST00000493430 IGLV4-3A0A075B6K6 122 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 A0A0G2JND7 137 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 A0A1W2PP18 115 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 CIB4A0PJX0 185 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 C5orf63A6NC05 138 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ANXA2P2A6NMY6 339 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 FTCDNL1E5RQL4 147 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 M0R3G1 203 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PDLIM1O00151 329 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 FXYD1O00168 92 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 RFXANKO14593 260 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 CASKO14936 926 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ARPC2O15144 300 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TM9SF1O15321 606 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 HDAC3O15379 428 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 BIRC5O15392 142 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TRAF3IP2O43734 574 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 STX11O75558 287 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 BCAS2O75934 225 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SLC2A10O95528 541 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ANP32DO95626 131 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 HLA-HP01893 362 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 BGLAPP02818 100 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 MT-ND1P03886 318 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TFF1P04155 84 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms