RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 AQP12AQ8IXF9 295 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 CMTM4Q8IZR5 234 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 CCDC197Q8NCU1 140 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 OR1M1Q8NGA1 313 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 SSMEM1Q8WWF3 244 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 PGAM5Q96HS1 289 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 HIST1H2AAQ96QV6 131 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 NIPSNAP1Q9BPW8 284 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 DNTTIP1Q9H147 329 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 CTSZQ9UBR2 303 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 CAB39Q9Y376 341 aaPredicted RBP10.33□□□□□ -0.76
COL6A1-205ENST00000492851 KPTNQ9Y664 436 aa10.33□□□□□ -0.76
COL6A1-205ENST00000492851 WNK2Q9Y3S1 2297 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 CENPVL3A0A0U1RRI6 287 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 hCG_38984A0A1B0GV85 526 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 A0A1B0GVI7 797 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 TMEM210A6NLX4 147 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 PRODHO43272 600 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 NDUFB3O43676 98 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 FAM107AO95990 144 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 MMP9P14780 707 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 OPRL1P41146 370 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 ZNF121P58317 390 aaPredicted RBP10.32□□□□□ -0.76
COL6A1-205ENST00000492851 CDONQ4KMG0 1287 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 SLC35D3Q5M8T2 416 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 ZNF826PQ6ZT77 177 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 PRSS45Q7RTY3 260 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 C11orf53Q8IXP5 236 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 TIGD4Q8IY51 512 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 PAPD5Q8NDF8 572 aaKnown RBP10.32□□□□□ -0.76
COL6A1-205ENST00000492851 OR10Z1Q8NGY1 313 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 OTOSQ8NHW6 89 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 THEM6Q8WUY1 208 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 LRRC29Q8WV35 223 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 DYRK2Q92630 601 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 RTL8AQ9BWD3 113 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 PAPOLGQ9BWT3 736 aaKnown RBP10.32□□□□□ -0.76
COL6A1-205ENST00000492851 TLNRD1Q9H1K6 362 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 OR51V1Q9H2C8 321 aa10.32□□□□□ -0.76
COL6A1-205ENST00000492851 RPUSD1Q9UJJ7 312 aaKnown RBP10.32□□□□□ -0.76
COL6A1-205ENST00000492851 ARHGAP32A7KAX9 2087 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 IGHV1-69DA0A0B4J2H0 117 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 C5orf63A6NC05 138 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 ACOD1A6NK06 481 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 FAM183AA6NL82 134 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 CST4P01036 141 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 KNG1P01042 644 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 IGHV1-69P01742 117 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 SFTPBP07988 381 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 PSKH1P11801 424 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 OSMP13725 252 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 ANXA8P13928 327 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 POU1F1P28069 291 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 ARF6P62330 175 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 GINS1Q14691 196 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 LRRC10Q5BKY1 277 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 ATPAF1Q5TC12 328 aaPredicted RBP10.31□□□□□ -0.76
COL6A1-205ENST00000492851 KCTD18Q6PI47 426 aaPredicted RBP10.31□□□□□ -0.76
COL6A1-205ENST00000492851 DEGS2Q6QHC5 323 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 WDR82Q6UXN9 313 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 C17orf107Q6ZR85 190 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 ST8SIA4Q92187 359 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 MED30Q96HR3 178 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 TBX15Q96SF7 602 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 RASSF4Q9H2L5 321 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 DPAGT1Q9H3H5 408 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 SMURF1Q9HCE7 757 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 VNN3Q9NY84 501 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 DNAJC27Q9NZQ0 273 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 PDP1Q9P0J1 537 aaPredicted RBP10.31□□□□□ -0.76
COL6A1-205ENST00000492851 FAM96BQ9Y3D0 163 aa10.31□□□□□ -0.76
COL6A1-205ENST00000492851 MDFIC2A0A1B0GVS7 189 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 CDIPTO14735 213 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 E2F6O75461 281 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 NDUFA7O95182 113 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 MELTFP08582 738 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 ATP6V1B1P15313 513 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 RAG2P55895 527 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 GUCA2AQ02747 115 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 GFOD2Q3B7J2 385 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 FAM76BQ5HYJ3 339 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 PLBD1Q6P4A8 553 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 METAP1DQ6UB28 335 aaPredicted RBP10.3□□□□□ -0.76
COL6A1-205ENST00000492851 FIP1L1Q6UN15 594 aaKnown RBP10.3□□□□□ -0.76
COL6A1-205ENST00000492851 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 KIR3DL3Q8N743 410 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 SCCPDHQ8NBX0 429 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 DNAJC9Q8WXX5 260 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 LRTOMTQ8WZ04 291 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 LHX4Q969G2 390 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 CCL13Q99616 98 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 THTPAQ9BU02 230 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 SIRPDQ9H106 197 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 MED20Q9H944 212 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 BRD7Q9NPI1 651 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 HAO2Q9NYQ3 351 aa10.3□□□□□ -0.76
COL6A1-205ENST00000492851 TAS2R1Q9NYW7 299 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms