RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 ZNF343Q6P1L6 599 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ZNF497Q6ZNH5 498 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 MRPL55Q7Z7F7 128 aaKnown RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 MREGQ8N565 214 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 C14orf178Q8N769 122 aaPredicted RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.31□□□□□ -2.04
SNX13-209ENST00000492626 KCNA7Q96RP8 456 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 KCNS3Q9BQ31 491 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 CALN1Q9BXU9 219 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 MRPL37Q9BZE1 423 aaKnown RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 LGALS13Q9UHV8 139 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SLC17A4Q9Y2C5 497 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 HIVEP3Q5T1R4 2406 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ZFC3H1O60293 1989 aaKnown RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 SVILO95425 2214 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 AHCTF1Q8WYP5 2266 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 CPAMD8Q8IZJ3 1885 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 E7EWF7 191 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 POLR1CO15160 346 aaPredicted RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 PIN1P1O15428 100 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 EIF4E2O60573 245 aaKnown RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 PRPS1P60891 318 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 TNNC1P63316 161 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 PRR4Q16378 134 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 C15orf32Q32M92 178 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ZNF829Q3KNS6 432 aaPredicted RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 C6orf183Q5T699 404 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 OR2G6Q5TZ20 316 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SCIMPQ6UWF3 145 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 PRSS58Q8IYP2 241 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 OR2L5Q8NG80 312 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 OR5K2Q8NHB8 316 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 DCUN1D4Q92564 292 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 TMEM230Q96A57 120 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 FAM3DQ96BQ1 224 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 RANBP9Q96S59 729 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 NAPGQ99747 312 aaPredicted RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 RIOK2Q9BVS4 552 aaKnown RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 EML4Q9HC35 981 aaKnown RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 ASF1BQ9NVP2 202 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 QPCTLQ9NXS2 382 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 KCNE1BA0A087WTH5 132 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ZNF816-ZNF321PA0A0X1KG74 233 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 C12orf77C9JDV5 145 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 K7N7A8 449 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SCAMP2O15127 329 aaKnown RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 YEATS4O95619 227 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 AQP1P29972 269 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 VEGFCP49767 419 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 VSNL1P62760 191 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ZNF92Q03936 586 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ACVR1Q04771 509 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SELENBP1Q13228 472 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 KIAA0040Q15053 153 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 USF2Q15853 346 aaPredicted RBP2.31□□□□□ -2.04
SNX13-209ENST00000492626 PGGHGQ32M88 737 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 PAGE3Q5JUK9 113 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 GPRC6AQ5T6X5 926 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 LRRC52Q8N7C0 313 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 LINC00469Q8N7U9 141 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 FBXO36Q8NEA4 188 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ERMNQ8TAM6 284 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 ACBD6Q9BR61 282 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 TMEM246Q9BRR3 403 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SYNDIG1Q9H7V2 258 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 KIF25Q9UIL4 384 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 PDZD2O15018 2839 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 SPG11Q96JI7 2443 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 SPTY2D1-AS1A0A0U1RR47 76 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 HAT1O14929 419 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ZDHHC11BP0C7U3 371 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ZNF250P15622 560 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 WARSP23381 471 aaKnown RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 LMO4P61968 165 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 KCTD19Q17RG1 926 aaPredicted RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 RFX4Q33E94 735 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 TMEM220Q6QAJ8 160 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 PQLC3Q8N755 202 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 C3orf56Q8N813 242 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 CATSPER1Q8NEC5 780 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ESR2Q92731 530 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ARHGDIGQ99819 225 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 RACGAP1Q9H0H5 632 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 TPK1Q9H3S4 243 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 RPF2Q9H7B2 306 aaKnown RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 RETNQ9HD89 108 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ABCB10Q9NRK6 738 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 PCYOX1Q9UHG3 505 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 CLEC4EQ9ULY5 219 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 RHBDD3Q9Y3P4 386 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ZFHX4Q86UP3 3567 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 M0QX08 132 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 SLC19A2O60779 497 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ATP6V1G2O95670 118 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 AIFM1O95831 613 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 THY1P04216 161 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 CLTAP09496 248 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ICAM2P13598 275 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 NPR2P20594 1047 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 SHC1P29353 583 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms