RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 EPHA1P21709 976 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 GNALP38405 381 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 GNB2P62879 340 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 CSNK2BP67870 215 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 MZT1Q08AG7 82 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF154Q13106 437 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 ZFP1Q6P2D0 407 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF322Q6U7Q0 402 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-209ENST00000492270 DCDC5Q6ZRR9 648 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 OR1M1Q8NGA1 313 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 OR8B3Q8NGG8 313 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 OR51G2Q8NGK0 314 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 PPP1R14AQ96A00 147 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 ITPKCQ96DU7 683 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 OR8B2Q96RD0 313 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 APOL4Q9BPW4 351 aa20.6■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF850A8MQ14 1090 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 LGALS8O00214 317 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 APOL3O95236 402 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 FSHBP01225 129 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 ALPLP05186 524 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 PITPNBP48739 271 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 RIDAP52758 137 aaKnown RBP20.59■□□□□ 0.89
UPF3A-209ENST00000492270 PAX2Q02962 417 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 PRDX4Q13162 271 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 PLEKHG7Q6ZR37 379 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 SSX6Q7RTT6 188 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 SPATA3Q8NHX4 192 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 FGF23Q9GZV9 251 aaPredicted RBP20.59■□□□□ 0.89
UPF3A-209ENST00000492270 PBOV1Q9GZY1 135 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 CLN6Q9NWW5 311 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 HAO2Q9NYQ3 351 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 CTSZQ9UBR2 303 aa20.59■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF254O75437 659 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 SRSF10O75494 262 aaKnown RBP20.58■□□□□ 0.89
UPF3A-209ENST00000492270 PSMB10P40306 273 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF841Q6ZN19 808 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 NLRC3Q7RTR2 1065 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 TEX29Q8N6K0 151 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 NANPQ8TBE9 248 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 PIGCQ92535 297 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 TBX5Q99593 518 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 USE1Q9NZ43 259 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 ZNF391Q9UJN7 358 aa20.58■□□□□ 0.89
UPF3A-209ENST00000492270 IGHV3OR15-7A0A075B7D8 119 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 A0A0U1RQV5 110 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 OOEPA6NGQ2 149 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 ZNF670-ZNF695F2Z2N8 137 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 LHBP01229 141 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 DCTDP32321 178 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 ZNF829Q3KNS6 432 aaPredicted RBP20.57■□□□□ 0.88
UPF3A-209ENST00000492270 ZIK1Q3SY52 487 aaPredicted RBP20.57■□□□□ 0.88
UPF3A-209ENST00000492270 FTMTQ8N4E7 242 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 OR8J1Q8NGP2 316 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 FAM81AQ8TBF8 368 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 OR51E1Q8TCB6 317 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 LRRC29Q8WV35 223 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 HPSE2Q8WWQ2 592 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 UBE2FQ969M7 185 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 C19orf24Q9BVV8 132 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 CLN8Q9UBY8 286 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 WARS2Q9UGM6 360 aaKnown RBP20.57■□□□□ 0.88
UPF3A-209ENST00000492270 NUFIP1Q9UHK0 495 aaKnown RBP20.57■□□□□ 0.88
UPF3A-209ENST00000492270 MRM2Q9UI43 246 aaKnown RBP20.57■□□□□ 0.88
UPF3A-209ENST00000492270 MPC1Q9Y5U8 109 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 AUP1Q9Y679 476 aa20.57■□□□□ 0.88
UPF3A-209ENST00000492270 ACOD1A6NK06 481 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 ANXA2P2A6NMY6 339 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 PHYHO14832 338 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 VENTXO95231 258 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 CST4P01036 141 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 IGLV3-1P01715 115 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 CPT2P23786 658 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 HTR1FP30939 366 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 POU4F2Q12837 409 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 SNCBQ16143 134 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 LIPNQ5VXI9 398 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 WDR25Q64LD2 544 aaPredicted RBP20.56■□□□□ 0.88
UPF3A-209ENST00000492270 WDR82Q6UXN9 313 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 COMMD2Q86X83 199 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 FAM90A1Q86YD7 464 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 GALNT4Q8N4A0 578 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 EME1Q96AY2 570 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 DACT3Q96B18 629 aaPredicted RBP20.56■□□□□ 0.88
UPF3A-209ENST00000492270 FAM71F1Q96KD3 344 aaPredicted RBP20.56■□□□□ 0.88
UPF3A-209ENST00000492270 MNTQ99583 582 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 MICU1Q9BPX6 476 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 GPR84Q9NQS5 396 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 GTF2A1LQ9UNN4 478 aa20.56■□□□□ 0.88
UPF3A-209ENST00000492270 IGHV2-70DA0A0C4DH43 119 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 CDIPTO14735 213 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 TNFRSF13BO14836 293 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-209ENST00000492270 GYPAP02724 150 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 TTRP02766 147 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 ALDH3A2P51648 485 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 CDC42P60953 191 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 ELF3P78545 371 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-209ENST00000492270 IL5RAQ01344 420 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 DMRTC1Q5HYR2 192 aa20.55■□□□□ 0.88
UPF3A-209ENST00000492270 CBR4Q8N4T8 237 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms