RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 A0A1B0GUS0 222 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM183AA6NL82 134 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 GPR37O15354 613 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 PRODHO43272 600 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 HOXA3O43365 443 aaPredicted RBP6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 TOX4O94842 621 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 CST1P01037 141 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 IGHV1-69P01742 117 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 GYPAP02724 150 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 GRPP07492 148 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 MELTFP08582 738 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 ALOX5APP20292 161 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 SLC2A5P22732 501 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 ACKR3P25106 362 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 MXRA7P84157 204 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 EIF2B1Q14232 305 aaKnown RBP6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 GINS1Q14691 196 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 PDCD1Q15116 288 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 TAF13Q15543 124 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 SNCBQ16143 134 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 CDONQ4KMG0 1287 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 GPR157Q5UAW9 335 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 C1orf122Q6ZSJ8 110 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 BTN2A1Q7KYR7 527 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 LDLRAD3Q86YD5 345 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 ERI1Q8IV48 349 aaKnown RBP6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 PAPD5Q8NDF8 572 aaKnown RBP6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 OR6K6Q8NGW6 343 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 OR10Z1Q8NGY1 313 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 TEX47Q8TBZ9 253 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 OR5P3Q8WZ94 311 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 LYZL4Q96KX0 146 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 FGF23Q9GZV9 251 aaPredicted RBP6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 DNTTIP1Q9H147 329 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 OR10A2Q9H208 303 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 RASSF4Q9H2L5 321 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 CNTD2Q9H8S5 307 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 MED20Q9H944 212 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 C1RLQ9NZP8 487 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 RPUSD1Q9UJJ7 312 aaKnown RBP6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 ZNF391Q9UJN7 358 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 RHBDD3Q9Y3P4 386 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 MPC1Q9Y5U8 109 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 KPTNQ9Y664 436 aa6.91□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 ACOD1A6NK06 481 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 IGLV3-1P01715 115 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 HMGN1P05114 100 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 OSMP13725 252 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 MDKP21741 143 aaPredicted RBP6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 IER3P46695 156 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 CSNK2BP67870 215 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 EFNB1P98172 346 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 IL5RAQ01344 420 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 ROM1Q03395 351 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 MICBQ29980 383 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 SLC35D3Q5M8T2 416 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 STUMQ69YW2 141 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 DEGS2Q6QHC5 323 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 FAM57BQ71RH2 274 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 IQCF1Q8N6M8 205 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 KIR3DL3Q8N743 410 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 OR6N2Q8NGY6 317 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 NPRL2Q8WTW4 380 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 LRRC29Q8WV35 223 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 SSMEM1Q8WWF3 244 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 GATAD2BQ8WXI9 593 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 TAF15Q92804 592 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 TNFRSF14Q92956 283 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 CLPTM1LQ96KA5 538 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 TECTBQ96PL2 329 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 CITED1Q99966 193 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 PCGF1Q9BSM1 259 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 CHIAQ9BZP6 476 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 MMADHCQ9H3L0 296 aaPredicted RBP6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 NIPAL2Q9H841 368 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 SLC25A19Q9HC21 320 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 ABCB9Q9NP78 766 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 ACOXLQ9NUZ1 547 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 KLHDC2Q9Y2U9 406 aa6.9□□□□□ -1.3
SMARCB1-207ENST00000491967 A0A0U1RQV5 110 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 A0A1B0GW55 424 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 TCRBV3S1A0A5B6 114 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 A6NLC8 198 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 TMEM210A6NLX4 147 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 PRR23D1E9PI22 279 aaPredicted RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 H3BN98 237 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 CDIPTO14735 213 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 TBX1O43435 398 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 SELENOFO60613 162 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 ANXA2P07355 339 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 LYNP07948 512 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 H2BFMP0C1H6 154 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DUX4L2P0CJ85 424 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DUX4L3P0CJ86 424 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DUX4L4P0CJ87 422 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DUX4L5P0CJ88 424 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DUX4L6P0CJ89 424 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms