RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PAPOLGQ9BWT3 736 aaKnown RBP11.48□□□□□ -0.57
SHOX2-205ENST00000490689 SLC17A5Q9NRA2 495 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF275Q9NSD4 429 aaPredicted RBP11.48□□□□□ -0.57
SHOX2-205ENST00000490689 DKKL1Q9UK85 242 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 PIGLQ9Y2B2 252 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 TMEM127O75204 238 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 C1QL1O75973 258 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 SCGB1D1O95968 90 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 ACTL6AO96019 429 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 TSPO2Q5TGU0 170 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 MOB3CQ70IA8 216 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 C20orf196Q8IYI0 205 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 C11orf40Q8WZ69 217 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 REG4Q9BYZ8 158 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 GPR173Q9NS66 373 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 LINC01553A4QN01 128 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 LILRB3O75022 631 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 SFT2D2O95562 160 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 GUSBP08236 651 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 SMIM6P0DI80 62 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 DLX2Q07687 328 aaPredicted RBP11.48□□□□□ -0.57
SHOX2-205ENST00000490689 NPSR1Q6W5P4 371 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.48□□□□□ -0.57
SHOX2-205ENST00000490689 RTN4IP1Q8WWV3 396 aaPredicted RBP11.48□□□□□ -0.57
SHOX2-205ENST00000490689 ANKRD9Q96BM1 317 aaPredicted RBP11.48□□□□□ -0.57
SHOX2-205ENST00000490689 TCTN2Q96GX1 697 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 TSC2P49815 1807 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 PSME4Q14997 1843 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 BPNT1O95861 308 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 DDAH2O95865 285 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 OR3A4PP47883 348 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 MALLQ13021 153 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 MFAP5Q13361 173 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 PHF19Q5T6S3 580 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 SPTSSAQ969W0 71 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 OR51B6Q9H340 312 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 TMPRSS5Q9H3S3 457 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 ALKBH4Q9NXW9 302 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 CXorf51AA0A1B0GTR3 108 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF587BE7ETH6 402 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 PRAMEF26H0Y7S4 382 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 AP4M1O00189 453 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 SPINT1O43278 529 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 IFNA1P01562 189 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 FAHP16930 419 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 GFERP55789 205 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 RPS4XP62701 263 aaKnown RBP11.47□□□□□ -0.57
SHOX2-205ENST00000490689 PARM1Q6UWI2 310 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 ARRDC1Q8N5I2 433 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 TUBG2Q9NRH3 451 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 C19orf12Q9NSK7 152 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 DNAH12Q6ZR08 3092 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 FREM3P0C091 2139 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 HPNP05981 417 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 RAB5AP20339 215 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
SHOX2-205ENST00000490689 MICBQ29980 383 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 CMTM1Q8IZ96 169 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 OR8U1Q8NH10 309 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 SLC25A31Q9H0C2 315 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF286AQ9HBT8 521 aa11.47□□□□□ -0.57
SHOX2-205ENST00000490689 GVINP1Q7Z2Y8 2422 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 TRBV11-1A0A0K0K1C0 115 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 A0A1W2PP11 408 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 CYR61O00622 381 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 SSSCA1O60232 199 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 ADAM11O75078 769 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 MOSPD3O75425 235 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 GSK3AP49840 483 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 SRSF3P84103 164 aaKnown RBP11.46□□□□□ -0.57
SHOX2-205ENST00000490689 TMEM196Q5HYL7 178 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 LGI3Q8N145 548 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 VSTM2LQ96N03 204 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 WDR13Q9H1Z4 485 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 KCNK7Q9Y2U2 307 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 PTPRDP23468 1912 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 E5RGE8 158 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF345Q14585 488 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 TMEM268Q5VZI3 342 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 C15orf54Q8N8G6 183 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 SDSLQ96GA7 329 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 TOX2Q96NM4 488 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 LAT2Q9GZY6 243 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 NKX2-4Q9H2Z4 354 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 RAB18Q9NP72 206 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 NSG2Q9Y328 171 aa11.46□□□□□ -0.57
SHOX2-205ENST00000490689 TMEM184BQ9Y519 407 aaPredicted RBP11.46□□□□□ -0.57
SHOX2-205ENST00000490689 C17orf51A8MQB3 221 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 FOSL1P15407 271 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 HIST1H1DP16402 221 aaKnown RBP11.46□□□□□ -0.58
SHOX2-205ENST00000490689 TBPP20226 339 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 G0S2P27469 103 aa11.46□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF266Q14584 549 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms